Syntrophobacter fumaroxidans MPOB |
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Putative Syntrophobacter fumaroxidans MPOB RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9418
Complete sequence: 4,990,251 bp
GenBank #: CP000478 (NC_008554)
REBASE acronym: SfuM
Org_num: 4343
All begin Sfum_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3861 | ATPase, AAA+ superfamily | |||
| 3862 | R | 196 aa hypothetical protein | SfuMORF3862P | |
| 3863 | filamentation induced by cAMP protein Fic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 409 | transcriptional regulator, AbrB family | |||
| 410 | RM | Aba761ORF1095AP (40% identity) | SfuMORF410P | |
| 411 | helicase domain protein | |||
| 1321 | 528 aa hypothetical protein | |||
| 1322 | M | M.Spe345ORF1270P (55% identity) | GAGCTC | M.SfuMORF1322P |
| 1323 | 682 aa hypothetical protein | |||
| 2531 | protein of unknown function DUF111 | |||
| 2532 | M | M.NspAM1ORF9760P (64% identity) | CTGCAG | M.SfuMORF2532P |
| 2533 | R | SmaY426ORF27P (67% identity) | CTGCAG | SfuMORF2532P |
| 2534 | restriction endonuclease | |||
| 2796 | ATPase (AAA+ superfamily)-like | |||
| 2797 | M | M.GhaSAP1ORF16085P (64% identity) | M.SfuMORF2797P | |
| 2798 | V | V.Dla10312ORFFP (31% identity) | V.SfuMORF2797P | |
| 2799 | HNH endonuclease | |||
| ??? | hypothetical protein | |||
| 2799 | R | TspsG1ORF1671P (68% identity) | SfuMORF3492P | |
| 2800 | 311 aa conserved hypothetical protein | |||
| 3805 | 117 aa conserved hypothetical protein | |||
| 3806 | M | M.Ppr5001ORF486P (99% identity) | GGATC | M.SfuMORF3806P |
| 3807 | 120 aa conserved hypothetical protein | |||
| 3844 | phage transcriptional regulator, AlpA | |||
| 3845 | M | M.Gsp01ORF4120P (98% identity) | GTCGAC | M.SfuMORF3845P |
| 3846 | helicase domain protein | |||
| 3846 | helicase domain protein | |||
| 3847 | RM | DvuL2ORF4075P (66% identity) | SfuMORF3847P | |
| 3848 | 153 aa hypothetical protein | |||
| 3852 | phospholipase D/Transphosphatidylase | |||
| 3853 | R | DbaKORF2578P (99% identity) | GTCGAC | SfuMORF3853P |
| 3854 | V | V.DbaKORF2578P (78% identity) | V.SfuMORF3853P | |
| 3855 | 461 aa conserved hypothetical protein | |||
| 3883 | 138 aa hypothetical protein | |||
| 3884 | M | M.McaGBS15ORF2225P (59% identity) | GATC | M.SfuMORF3884P |
| 3885 | 335 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | MT-A70 family protein | |||
| 2855 | R | DteS28bFORFBP (81% identity) | SfuMORF2856P | |
| 2856 | M | M.TunA1ORF10380P (78% identity) | M.SfuMORF2856P | |
| 2857 | AAA ATPase, central domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1437 | 90 aa hypothetical protein | |||
| 1438 | R | Psp0004ORF1240P (41% identity) | SfuMORF1438P | |
| 1439 | protein of unknown function SprT | |||
| 2533 | Type II site-specific deoxyribonuclease | |||
| 2534 | R | Ssp3757MrrP (56% identity) | SfuMMrrP | |
| 2535 | protein of unknown function DUF1566 | |||