Paraprevotella xylaniphila YIT 11841 |
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Putative Paraprevotella xylaniphila YIT 11841 RM systems
Ref: Weinstock,G. et al. unpublished
REBASE ref # 12476
Contig set: 3,789,791 bp
GenBank #: AFBR00000000 (NZ_AFBR00000000)
REBASE acronym: Pxy
Org_num: 7015
All begin HMPREF9442_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2611 | conserved domain protein | |||
| 2612 | S | S.PmeBin2ORFEP (53% identity) | S.PxyORF2613P | |
| 2613 | M | M.Pdo1047ORF8450P (96% identity) | M.PxyORF2613P | |
| 2614 | C | C.PmeBin2ORFEP (92% identity) | C.PxyORF2613P | |
| 2616 | 67 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 360 | transcriptional regulator, HxlR family | |||
| 361 | C | C.Pxy11841ORFHP (100% identity) | C.PxyORF362P | |
| 362 | M | M2.Pxy11841ORFHP (100% identity) | GATC | M1.PxyORF362P |
| 363 | R | R2.Pxy11841ORFHP (100% identity) | GATC | R1.PxyORF362P |
| 364 | R | R1.Pxy11841ORFHP (99% identity) | GATC | R2.PxyORF362P |
| 365 | M | M1.Pxy11841ORFHP (100% identity) | GATC | M2.PxyORF362P |
| 366 | 509 aa hypothetical protein | |||
| 317 | 41 aa hypothetical protein | |||
| 318 | M | M.Pje697I (74% identity) | GGTGA | M.PxyORF318P |
| 319 | R | MspA4ORF11150P (59% identity) | PxyORF318P | |
| 320 | replicative DNA helicase | |||
| 1222 | DNA (cytosine-5-)-methyltransferase | |||
| 1223 | M | M2.Pxy11841ORFLP (66% identity) | M.PxyORF1223P | |
| 1224 | 86 aa hypothetical protein | |||
| 1221 | phosphoadenosine phosphosulfate reductase family | |||
| 1222 | M | M.NroP709ORFAP (53% identity) | GACGC | M.PxyORF1222P |
| 1223 | DNA (cytosine-5-)-methyltransferase | |||
| 2070 | 310 aa hypothetical protein | |||
| 2071 | R | PxyORF2071P (100% identity) | C | PxyI |
| 2072 | conserved domain protein | |||
| 2065 | DNA-binding helix-turn-helix protein | |||
| 2066 | RM | Pxy11841ORFJP (81% identity) | PxyORF2066P | |
| 2067 | 127 aa hypothetical protein | |||
| 2070 | 310 aa hypothetical protein | |||
| 2071 | R | PxyI (100% identity) | PxyORF2071P | |
| 2072 | conserved domain protein | |||
| 2397 | conserved domain protein | |||
| 2398 | M | M1.Pxy11841ORFIP (100% identity) | M1.PxyORF2398P | |
| 2399 | M | M2.Pxy11841ORFIP (100% identity) | M2.PxyORF2398P | |
| 2400 | conserved domain protein | |||
| 2591 | 265 aa hypothetical protein | |||
| 2592 | RM | Pvu191ORF4115P (34% identity) | PxyORF2592P | |
| 2593 | resolvase protein | |||
| 2590 | 1053 aa hypothetical protein | |||
| 2591 | RM | BxyH207ORF12360P (26% identity) | PxyORF2591P | |
| 2592 | conserved domain protein | |||
| 3458 | TonB-dependent receptor plug domain protein | |||
| 3459 | M | M.Pxy11841ORFCP (99% identity) | CCGCGG | M.PxyORF3459P |
| 3460 | R | Pxy11841ORFCP (99% identity) | CCGCGG | PxyORF3459P |
| 3461 | response regulator receiver domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1996 | 92 aa hypothetical protein | |||
| 1995 | R | Pcl1C4MrrP (91% identity) | PxyMrrP | |
| 1997 | 134 aa hypothetical protein | |||