Syntrophomonas wolfei str. Goettingen |
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Putative Syntrophomonas wolfei str. Goettingen RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref # 9418
Complete sequence: 2,936,195 bp
GenBank #: CP000448 (NC_008346)
REBASE acronym: SwoG
Org_num: 4344
All begin Swol_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 512 | M | M.Bsp834ORF2050P (86% identity) | M.SwoGORF512P | |
| 513 | S | S.Cst2910ORF2035P (24% identity) | S1.SwoGORF512P | |
| 514 | 548 aa hypothetical protein | |||
| 515 | S | S2.Baz2011ORF4868P (30% identity) | S2.SwoGORF512P | |
| 516 | R | Swo4J5ORFIP (95% identity) | SwoGORF512P | |
| 517 | sigma 28 (flagella/sporulation) | |||
| 2255 | zinc metalloprotease | |||
| 2256 | R | SspADCORF17890P (79% identity) | SwoGORF2258P | |
| 2257 | S | S.NspHC41ORF9285P (38% identity) | S.SwoGORF2258P | |
| 2258 | M | M.SspADCORF17930P (81% identity) | M.SwoGORF2258P | |
| 2259 | 153 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20 | 244 aa hypothetical protein | |||
| 21 | M | M.SspMJ3ORF8801P (47% identity) | CCSGG | M.SwoGORF21P |
| 22 | Multimeric flavodoxin WrbA-like protein | |||
| 501 | sigma 28 (flagella/sporulation) | |||
| 502 | R | PamM71ORF10580P (43% identity) | SwoGORF503P | |
| 503 | M | M.AteNZORF19650P (47% identity) | M1.SwoGORF503P | |
| 504 | M | adenine-specific DNA methylase containing a | M2.SwoGORF503P | |
| 505 | transposase | |||
| 990 | 1199 aa hypothetical protein | |||
| 991 | RM | Swo4J5ORFEP (22% identity) | SwoGORF991AP | |
| 992 | 356 aa hypothetical protein | |||
| 993 | Restriction endonuclease-like protein | |||
| 994 | RM | Swo4J5ORFEP (19% identity) | SwoGORF991BP | |
| 995 | transposase IS3/IS911 | |||
| 996 | integrase, catalytic region | |||
| 997 | RM | Swo4J5ORFEP (49% identity) | SwoGORF991CP | |
| 998 | 746 aa hypothetical protein | |||
| 2008 | 266 aa hypothetical protein | |||
| 2009 | M | M.MthMBAORF6030P (61% identity) | M.SwoGORF2009P | |
| 2010 | 1144 aa conserved hypothetical protein | |||
| 2492 | transcriptional regulator | |||
| 2493 | RM | Msp596ORF1709P (55% identity) | SwoGORF2493P | |
| 2494 | 1185 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 837 | pseudogene | |||
| 838 | M | M.SwoGORF2040P (100% identity) | M.SwoGORF838P | |
| 839 | Rossmann-fold nucleotide-binding protein | |||
| 1460 | pseudogene | |||
| 1462 | R | PmeBin76ORFAP (79% identity) | SwoGORF1463P | |
| 1463 | M | M.Csp9000ORF10355P (69% identity) | M.SwoGORF1463P | |
| 1464 | C | C.Dmc2ORF2515P (53% identity) | C.SwoGORF1463P | |
| 1465 | 770 aa conserved hypothetical protein | |||
| 1546 | 165 aa hypothetical protein | |||
| 1547 | R | Swo4J5ORFGP (97% identity) | SwoGORF1548P | |
| 1548 | M | M.PmeBin362ORFCP (51% identity) | M.SwoGORF1548P | |
| 1549 | 253 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 992 | 356 aa hypothetical protein | |||
| 993 | R | RflFMrrP (12% identity) | SwoGMrrP | |
| 994 | 309 aa hypothetical protein | |||
| 1115 | 113 aa hypothetical protein | |||
| 1116 | R | RmaSGMcrB2P (27% identity) | SwoGMcrB2P | |
| 1117 | 825 aa hypothetical protein | |||
| 1116 | GTPase subunit of restriction endonuclease-like | |||
| 1117 | R | Rma4252McrBP (16% identity) | SwoGMcrBP | |
| 1118 | 1009 aa conserved hypothetical protein | |||