Desulfovibrio desulfuricans ND132 |
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Putative Desulfovibrio desulfuricans ND132 RM systems
Ref: Brown,S.D. et al. J. Bacteriol. 193 (8), 2078-2079 (2011)
REBASE ref # 12645
| Sequence length: | GenBank #: | |
| Chromosome: | 3,858,683 bp | AEUJ01000000 |
| Chromosome: | 3,858,580 bp | CP003220 |
REBASE acronym: Dde132
Org_num: 6888
All begin DND132_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | restriction modification system DNA specificity domain protein | |||
| ??? | M | M.Dde132ORF555P (100% identity) | M.Dde132ORFAP | |
| ??? | R | Dde132ORF555P (96% identity) | Dde132ORFAP | |
| ??? | S | S.Dde132ORF1499P (100% identity) | S.Dde132ORFDP | |
| ??? | M | M.Dde132ORF1499P (98% identity) | M.Dde132ORFDP | |
| ??? | R | Dde132ORF1499P (100% identity) | Dde132ORFDP | |
| ??? | DNA methylase N-4/N-6 domain protein | |||
| ??? | R | DspOc1ORF1772P (98% identity) | Dde132ORFCP | |
| ??? | S | S2.Psp1480ORF16795P (60% identity) | S1.Dde132ORFCP | |
| ??? | M | M.DspOc1ORF1772P (98% identity) | M.Dde132ORFCP | |
| ??? | S | S2.DspOc1ORF1772P (81% identity) | S2.Dde132ORFCP | |
| ??? | M | M.DinSCBMORF5690P (88% identity) | M.Dde132ORFEP | |
| ??? | S | S.Bce433ORFBP (42% identity) | S.Dde132ORFEP | |
| ??? | R | DinSCBMORF5690P (86% identity) | Dde132ORFEP | |
| Chromosome | ||||
| 553 | 37 aa hypothetical protein | |||
| 554 | S | S.Psp415ORF10245P (50% identity) | S.Dde132ORF555P | |
| 555 | M | M.Dde132ORFAP (100% identity) | M.Dde132ORF555P | |
| 556 | R | Dde132ORFAP (96% identity) | Dde132ORF555P | |
| 557 | 96 aa hypothetical protein | |||
| 1497 | ABC transporter | |||
| 1498 | S | S.Dde132ORFDP (100% identity) | S.Dde132ORF1499P | |
| 1499 | M | M.Dde132ORFDP (98% identity) | M.Dde132ORF1499P | |
| 1500 | R | Dde132ORFDP (100% identity) | Dde132ORF1499P | |
| 1501 | integrase family protein | |||
| 1498 | restriction modification system DNA specificity | |||
| ??? | M | M.Dde132ORF1499P (98% identity) | M.Dde132ORFDP | |
| 1500 | Type I site-specific deoxyribonuclease | |||
| 2203 | protein of unknown function DUF45 | |||
| 2204 | R | DspOc1ORF1772P (98% identity) | Dde132ORFCP | |
| 2205 | SEFIR domain protein | |||
| 2206 | 104 aa hypothetical protein | |||
| 2207 | 75 aa hypothetical protein | |||
| 2208 | 274 aa hypothetical protein | |||
| 2209 | S | S2.Psp1480ORF16795P (60% identity) | S1.Dde132ORFCP | |
| 2210 | DNA damage-inducible protein D | |||
| 2211 | 341 aa hypothetical protein | |||
| 2212 | M | M.DspOc1ORF1772P (98% identity) | M.Dde132ORFCP | |
| 2213 | S | S2.DspOc1ORF1772P (81% identity) | S2.Dde132ORFCP | |
| 2214 | helix-turn-helix domain protein | |||
| 3152 | 284 aa hypothetical protein | |||
| 3153 | M | M.DinSCBMORF5690P (88% identity) | M.Dde132ORFEP | |
| 3154 | anticodon nuclease | |||
| ??? | S | S.Bce433ORFBP (42% identity) | S.Dde132ORFEP | |
| 3156 | R | DinSCBMORF5690P (86% identity) | Dde132ORFEP | |
| 3157 | multi-sensor signal transduction histidine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.Ppo14722ORF17080P (97% identity) | M.Dde132ORFBP | |
| ??? | type I site-specific deoxyribonuclease, HsdR family | |||
| Chromosome | ||||
| 1494 | helix-turn-helix domain protein | |||
| 1495 | M | M.Psp5S69ORF14925P (95% identity) | M.Dde132ORF1495P | |
| 1496 | 357 aa hypothetical protein | |||
| 2201 | helix-turn-helix domain protein | |||
| 2202 | M | M.Ppo14722ORF17080P (97% identity) | M.Dde132ORFBP | |
| 2203 | protein of unknown function DUF45 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | Dde132McrB2P (100% identity) | Dde132McrBP | |
| Chromosome | ||||
| 1438 | protein of unknown function DUF524 | |||
| ??? | R | Dde132McrBP (100% identity) | Dde132McrB2P | |
| 1440 | UvrD/REP helicase | |||