Neisseria meningitidis N1568 |
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Putative Neisseria meningitidis N1568 RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. In press
REBASE ref # 12558
GenBank #: AEQD00000000
REBASE acronym: Nme1568
Org_num: 6777
All begin NMXN1568_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 953 | hypothetical protein | |||
| ??? | M | hypothetical protein | M.Nme1568ORF954P | |
| 955 | IS1106 transposase | |||
| 956 | M | type I restriction-modification system DNA-methyltransferase | M.Nme1568ORF956P | |
| 957 | uracil-DNA glycosylase | |||
| 1306 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1307 | R | Nme22814ORFCP (81% identity) | Nme1568ORF1307P | |
| 1308 | transposase for insertion sequence element | |||
| 1309 | transposase for insertion sequence element | |||
| 1310 | R | 128 aa hypothetical protein | Nme1568ORF1314P | |
| 1311 | 380 aa hypothetical protein | |||
| 1312 | S | S.NmeH44ORF1653P (100% identity) | S.Nme1568ORF1314P | |
| 1313 | 336 aa hypothetical protein | |||
| 1314 | M | M.NmeMC58ORF829P (99% identity) | M.Nme1568ORF1314P | |
| 1315 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 56 | S1 RNA binding domain protein | |||
| 57 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M.Nme1568ORF57P |
| 58 | hypothetical protein | |||
| 252 | R | R2.NmeS4ORFBP (99% identity) | CCTTC | Nme1568ORF252P |
| 253 | IS1106 transposase | |||
| 899 | 3-isopropylmalate dehydrogenase | |||
| 900 | R | NmeMC58ORF1033P (100% identity) | GGNNCC | Nme1568ORF901P |
| 901 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme1568ORF901P |
| 902 | 3-isopropylmalate dehydratase, small subunit | |||
| 1067 | IS1106 transposase | |||
| 1068 | M | M.Nme3683ORF1405P (99% identity) | CCTTC | M.Nme1568ORF1068P |
| 1069 | R | 91 aa hypothetical protein | CCTTC | Nme1568ORF1068P |
| 1315 | ADP-glyceromanno-heptose 6-epimerase | |||
| 1316 | R | Nme99ORF1246P (100% identity) | CCAGA | Nme1568ORF1317P |
| 1317 | M | M.Nme24705ORF9520P (100% identity) | CCAGA | M.Nme1568ORF1317P |
| 1318 | hldE bifunctional protein, domain I | |||
| 1411 | phenylalanyl-tRNA synthetase, beta subunit | |||
| 1412 | M | M2.NmeMC58II (100% identity) | GACGC | M.Nme1568ORF1412P |
| ??? | R | NmeMC58IIP (71% identity) | GACGC | Nme1568ORF1412P |
| ??? | R | NmeMC58IIP (19% identity) | GACGC | Nme1568ORF1414P |
| 1414 | M | M1.NmeMC58IIP (100% identity) | GACGC | M.Nme1568ORF1414P |
| 1415 | phenylalanyl-tRNA synthetase, alpha subunit | |||
| 1754 | 159 aa hypothetical protein | |||
| 1755 | M | M2.Nme292ORF45P (99% identity) | GATC | M1.Nme1568ORF1755P |
| 1756 | M | M2.Nme22814ORFLP (83% identity) | GATC | M2.Nme1568ORF1755P |
| 1757 | transposase, IS30 family | |||
| 1874 | ATP-dependent RNA helicase hrpA | |||
| 1875 | V | V.Nme22814ORFKP (100% identity) | V.Nme1568ORF1879P | |
| 1876 | R | 276 aa hypothetical protein NMA0428 | CCGG | Nme1568ORF1879AP |
| 1877 | insertion element transposase | |||
| 1878 | R | Nme22814ORFKP (45% identity) | CCGG | Nme1568ORF1879BP |
| 1879 | M | M.Nme8249ORF2194P (94% identity) | CCGG | M.Nme1568ORF1879P |
| 1880 | IS1106 transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 782 | L-lactate dehydrogenase | |||
| 783 | R | Nme22814ORFDP (100% identity) | Nme1568ORF784P | |
| 784 | M | M.Nme44ORF843P (95% identity) | M.Nme1568ORF784P | |
| 785 | tRNA pseudouridine synthase B | |||