Yersinia pestis biovar Antiqua E1979001 |
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Putative Yersinia pestis biovar Antiqua E1979001 RM systems
Ref: Eppinger,M. et al. J. Bacteriol. 191 (24), 7628-7629 (2009)
REBASE ref # 11389
Contig set: 4,847,813 bp
GenBank #: AAYV00000000
REBASE acronym: YpeAE
Org_num: 5667
All begin YpE1979001_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3208 | DNA mismatch repair enzyme | |||
| 3209 | M | M.YpeZORF386P (100% identity) | CCWGG | M.YpeAEORF3209P |
| 3210 | transposase subfamily | |||
| 465 | transposition helper protein | |||
| 466 | M | M.YpeZORF1740P (100% identity) | TGGCCA | M.YpeAEORF466P |
| 467 | protein Nin B | |||
| 1151 | ribulose-phosphate 3-epimerase | |||
| 1152 | M | M.Ysi228DamP (100% identity) | GATC | M.YpeAEDamP |
| 1153 | DamX protein | |||
| 1995 | 73 aa conserved hypothetical protein | |||
| 1996 | M | M.YpeZORF72P (100% identity) | M.YpeAEORF1996P | |
| 1997 | 66 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3210 | transposase subfamily | |||
| 3211 | R | YpeZMcrCP (100% identity) | YpeAEMcrCP | |
| 3212 | R | YpeZMcrBP (100% identity) | YpeAEMcrBP | |
| 3213 | transposase for insertion sequence | |||