Lactobacillus amylovorus GRL1118 |
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Putative Lactobacillus amylovorus GRL1118 RM systems
Ref: Kant,R. et al. unpublished
REBASE ref # 12612
| Sequence length: | GenBank #: | |
| Chromosome: | 1,894,401 bp | CP002609 |
| plasmid plasmid2: | 78,145 bp | CP002611 |
REBASE acronym: Lam1118
Org_num: 6831
All begin LAB52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7110 | 697 aa hypothetical protein | |||
| 7115 | R | LamGRLORF8135P (96% identity) | Lam1118ORF7135P | |
| 7120 | S | S.Bsp81119ORF1195P (34% identity) | S1.Lam1118ORF7135P | |
| 7125 | phage integrase family protein | |||
| 7130 | S | S1.LreRTRORFBP (69% identity) | S2.Lam1118ORF7135P | |
| 7135 | M | M.LamGRLORF8135P (99% identity) | M.Lam1118ORF7135P | |
| 7140 | 167 aa hypothetical protein | |||
| plasmid plasmid2 | ||||
| 9903 | N-6 DNA methylase | |||
| 9908 | M | M.LjoN31ORF5990P (85% identity) | M.Lam1118ORF9903P | |
| 9913 | S | S.Hha201919ORF14700P (51% identity) | S.Lam1118ORF9903P | |
| 9918 | R | LdeLJJIBP (38% identity) | Lam1118ORF9903P | |
| 9923 | 111 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 115 | CysE/LacA/LpxA/NodL family acetyltransferase | |||
| 120 | R | LamL4ORF9975P (100% identity) | Lam1118ORF120P | |
| 125 | cytosol non-specific dipeptidase | |||
| 5210 | 1233 aa hypothetical protein | |||
| 5215 | RM | Lga4ORF8535P (88% identity) | Lam1118ORF5215P | |
| 5220 | 277 aa hypothetical protein | |||
| 7540 | 74 aa hypothetical protein | |||
| 7545 | RM | Ssp3039ORF10170BP (50% identity) | Lam1118ORF7545P | |
| 7550 | type II restriction-modification system | |||
| 7545 | type II restriction endonuclease, putative | |||
| 7550 | RM | Lre384ORF635AP (60% identity) | Lam1118ORF7550P | |
| 7555 | type II restriction-modification system | |||
| 7550 | type II restriction-modification system | |||
| 7555 | M | M1.LsaM11ORF3645P (47% identity) | M.Lam1118ORF7555P | |
| 7560 | 197 aa hypothetical protein | |||
| plasmid plasmid2 | ||||
| 10073 | 80 aa hypothetical protein | |||
| 10078 | RM | Lam736ORF10330P (100% identity) | Lam1118ORF10078P | |
| 10083 | 195 aa hypothetical protein | |||
| 10188 | cation transport ATPase | |||
| 10193 | RM | type III restriction protein res subunit | Lam1118ORF10193P | |
| 10198 | 37 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 235 | Exodeoxyribonuclease III | |||
| 260 | R | LamGRLORF325P (99% identity) | Lam1118ORF260P | |
| 265 | penicillin-binding protein | |||
| 7105 | 136 aa hypothetical protein | |||
| 7110 | R | LamGRLGmrSDP (99% identity) | Lam1118GmrSDP | |
| 7115 | type III restriction protein, res subunit | |||
| plasmid plasmid2 | ||||
| 9953 | transposase, IS4 family protein | |||
| 9958 | R | LamGRLMrrP (47% identity) | Lam1118MrrP | |
| 9963 | 128 aa hypothetical protein | |||