Polymorphum gilvum SL003B-26A1 |
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Putative Polymorphum gilvum SL003B-26A1 RM systems
Ref: Nie,Y. et al. unpublished
REBASE ref # 12600
Complete sequence: 4,649,365 bp
GenBank #: CP002568 (NC_015259)
REBASE acronym: Pgi3
Org_num: 6817
All begin SL003B_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 709 | Transcriptional regulator | |||
| 710 | M | M.Dsp172E8ORF12775P (96% identity) | M.Pgi3ORF710P | |
| 711 | S | S.Psp75817ORF9470P (56% identity) | S.Pgi3ORF710P | |
| 712 | Transposase (Class II) | |||
| 3747 | 238 aa hypothetical protein | |||
| 3748 | R | PspS343ORF5995P (98% identity) | Pgi3ORF3751P | |
| 3749 | 243 aa hypothetical protein | |||
| 3750 | S | S.Pko0001ORF14535P (58% identity) | S1.Pgi3ORF3751P | |
| 3751 | M | M.PspS343ORF5995P (97% identity) | M.Pgi3ORF3751P | |
| 3752 | S | S1.Pfe100066ORF3740P (99% identity) | S2.Pgi3ORF3751P | |
| 3753 | Regulatory protein, LacI family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 296 | 85 aa hypothetical protein | |||
| 297 | M | M.SzoXJ20ORFJP (45% identity) | M.Pgi3ORF297P | |
| 298 | ParA-like protein | |||
| 1391 | Acetyltransferase, GNAT family | |||
| 1392 | RM | Pph9175ORF835P (29% identity) | Pgi3ORF1392P | |
| 1393 | 88 aa hypothetical protein | |||
| 1714 | 148 aa hypothetical protein | |||
| 1715 | M | M.Sspsand13ORF10290P (56% identity) | CGGCCG | M.Pgi3ORF1715P |
| 1716 | 360 aa hypothetical protein | |||
| 2595 | 702 aa hypothetical protein | |||
| 2596 | M | M.Pst25392ORF11930P (75% identity) | M.Pgi3ORF2596P | |
| 2597 | Prevent-host-death family protein | |||
| 3621 | 944 aa hypothetical protein | |||
| 3622 | M | M.SspX33ORF13755P (78% identity) | M.Pgi3ORF3622P | |
| 3623 | 213 aa hypothetical protein | |||
| 3763 | 39 aa hypothetical protein | |||
| 3764 | M | M.RbaD4M1ORF295P (94% identity) | M.Pgi3ORF3764P | |
| 3765 | Site-specific DNA methylase | |||
| 4054 | 67 aa hypothetical protein | |||
| 4055 | M | M.BbaAGun1ORFEP (91% identity) | M.Pgi3ORF4055P | |
| 4056 | 146 aa hypothetical protein | |||
| 4121 | 89 aa hypothetical protein | |||
| 4122 | M | M.PspSC26ORF11730P (90% identity) | GATC | M1.Pgi3ORF4122P |
| 4123 | M | M.Pgi3ORF3764P (92% identity) | M2.Pgi3ORF4122P | |
| 4124 | 39 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3371 | Probable DNA glycosylase protein | |||
| 3372 | M | M.RspSym1ORFEP (81% identity) | GANTC | M.Pgi3ORF3372P |
| 3373 | Tyrosyl-tRNA synthetase, class Ib | |||