Mycoplasma suis Illinois |
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Putative Mycoplasma suis Illinois RM systems
Ref: Guimaraes,A.M.S. et al. unpublished
REBASE ref # 12509
| Sequence length: | GenBank #: | |
| Chromosome: | 742,431 bp | CP002525 (NC_015155) |
| Chromosome: | 742,431 bp | ADWK00000000 (NZ_ADWK00000000) |
REBASE acronym: MsuIL
Org_num: 6742
All begin MSU_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 103 | 324 aa hypothetical protein | |||
| ??? | R | type I site-specific deoxyribonuclease, HsdR family protein | MsuILORF104P | |
| 105 | lipoprotein | |||
| 273 | 114 aa hypothetical protein | |||
| ??? | S | type I restriction-modification system specificity subunit | S1.MsuILORF279P | |
| 276 | 5-3 exonuclease, DNA polymerase I-like | |||
| ??? | S | type I restriction-modification system, specificity protein fragment, partial | S2.MsuILORF279P | |
| 279 | M | type I restriction-modification system, N-6 DNA | M.MsuILORF279P | |
| ??? | R | type I site-specific deoxyribonuclease, HsdR family protein | MsuILORF279P | |
| 283 | phosphodiesterase | |||
| 390 | glutamyl-tRNA synthetase | |||
| ??? | S | type I restriction-modification system specificity subunit | S1.MsuILORF391P | |
| 394 | 198 aa hypothetical protein | |||
| 395 | S | type I restriction-modification system | S2.MsuILORF391P | |
| 396 | S | type I restriction-modification system | S3.MsuILORF391P | |
| 397 | cytosine-specific DNA modification methylase, | |||
| 630 | 223 aa hypothetical protein | |||
| 631 | S | type I restriction-modification system | S.MsuILORF631P | |
| 632 | type I restriction-modification system specificity subunit | |||
| 631 | type I restriction-modification system | |||
| 632 | S | type I restriction-modification system specificity subunit | S.MsuILORF632P | |
| 633 | 271 aa hypothetical protein | |||
| 795 | 676 aa conserved hypothetical protein | |||
| 796 | S | type I restriction-modification system | S1.MsuILORF799P | |
| 797 | 123 aa hypothetical protein | |||
| 798 | pseudogene | |||
| 799 | M | type I restriction-modification system, N-6 DNA | M.MsuILORF799P | |
| ??? | S | type I restriction-modification system specificity subunit, partial | S2.MsuILORF799P | |
| ??? | S | type I restriction-modification system specificity subunit | S3.MsuILORF799P | |
| 805 | 70 aa hypothetical protein | |||
| 810 | 363 aa hypothetical protein | |||
| 811 | S | type I restriction-modification system | S.MsuILORF811P | |
| 812 | type I restriction-modification system | |||
| 812 | type I restriction-modification system | |||
| 813 | S | type I restriction-modification system | S.MsuILORF813P | |
| 814 | type I restriction-modification system | |||
| 814 | type I restriction-modification system | |||
| 815 | R | type I site-specific deoxyribonuclease, HsdR | MsuILORF815P | |
| 816 | S | type I restriction-modification system | S.MsuILORF815P | |
| 817 | 159 aa hypothetical protein | |||
| 817 | 159 aa hypothetical protein | |||
| 818 | R | type I site-specific deoxyribonuclease, HsdR | MsuILORF818P | |
| 819 | 212 aa hypothetical protein | |||
| 819 | 212 aa hypothetical protein | |||
| 820 | R | type I site-specific deoxyribonuclease, | MsuILORF820P | |
| 821 | 274 aa hypothetical protein | |||
| 821 | 274 aa hypothetical protein | |||
| 822 | R | type I site-specific deoxyribonuclease, HsdR | MsuILORF822P | |
| 823 | 84 aa hypothetical protein | |||
| Chromosome | ||||
| ??? | S | hypothetical protein | S.MsuILORFBP | |
| ??? | M | hypothetical protein | M.MsuILORFBP | |
| ??? | R | hypothetical protein | MsuILORFBP | |
| ??? | S | hypothetical protein | S1.MsuILORFFP | |
| ??? | M | hypothetical protein | M.MsuILORFFAP | |
| ??? | M | hypothetical protein | M.MsuILORFFBP | |
| ??? | S | hypothetical protein | S2.MsuILORFFP | |
| ??? | S | hypothetical protein | S3.MsuILORFFP | |
| ??? | S | hypothetical protein | S4.MsuILORFFP | |
| ??? | S | hypothetical protein | S5.MsuILORFFP | |
| ??? | hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | S | hypothetical protein | S1.MsuILORFGP | |
| ??? | S | hypothetical protein | S2.MsuILORFGP | |
| ??? | hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | S | hypothetical protein | S3.MsuILORFGP | |
| ??? | hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | R | hypothetical protein | R1.MsuILORFIP | |
| ??? | R | hypothetical protein | R2.MsuILORFIP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 396 | type I restriction-modification system | |||
| 397 | M | M.MsuILORFCP (99% identity) | CCNGG | M.MsuILORF397P |
| 398 | cobalt transporter ATP-binding protein CbiO | |||
| 396 | type I restriction-modification system | |||
| 397 | M | M.MsuILORF397P (99% identity) | CCNGG | M.MsuILORFCP |
| 398 | cobalt transporter ATP-binding protein CbiO | |||
| 839 | 50S ribosomal protein L33 | |||
| 848 | M | M.Msu3806ORF7780P (94% identity) | M.MsuILORF848P | |
| 849 | R | MsuILORFEP (79% identity) | GATC | MsuILORF848P |
| 850 | endonuclease IV, apurinic endonuclease | |||
| Chromosome | ||||
| ??? | hypothetical protein | |||
| ??? | M | M.MsuILORF397P (99% identity) | CCNGG | M.MsuILORFCP |
| ??? | M | M.MsuILORF848P (74% identity) | M.MsuILORFDP | |
| ??? | hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | R | hypothetical protein | GATC | MsuILORFEP |