Clostridium cf. saccharolyticum K10 |
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Putative Clostridium cf. saccharolyticum K10 RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12145
Complete sequence: 3,769,775 bp
GenBank #: FP929037
REBASE acronym: Ccf10
Org_num: 6695
All begin CLS_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9410 | 183 aa hypothetical protein | |||
| 9420 | M | M.Ebo30301ORF21965P (95% identity) | M.Ccf10ORF9420P | |
| ??? | S | S.Ebo30301ORF21965P (47% identity) | S.Ccf10ORF9420P | |
| 9440 | R | Ebo30301ORF21965P (96% identity) | Ccf10ORF9420P | |
| 9460 | 99 aa hypothetical protein | |||
| 14370 | Uncharacterized conserved protein | |||
| 14390 | R | Cse1583ORF15615P (22% identity) | Ccf10ORF14440P | |
| 14400 | S | S1.Amu8WCORF17930P (55% identity) | S1.Ccf10ORF14440P | |
| 14410 | S | S3.PmeBin382ORFDP (41% identity) | S2.Ccf10ORF14440P | |
| 14420 | Site-specific recombinase XerD | |||
| 14430 | S | S1.Cse1583ORF15615P (78% identity) | S3.Ccf10ORF14440P | |
| 14440 | M | M.Cse1583ORF15615P (100% identity) | M.Ccf10ORF14440P | |
| 14450 | 56 aa hypothetical protein | |||
| 19290 | 268 aa hypothetical protein | |||
| 19300 | M | M.PmeBin63ORFEP (96% identity) | M.Ccf10ORF19300P | |
| 19310 | 218 aa hypothetical protein | |||
| ??? | S | S.PmeBin658ORFAP (57% identity) | S.Ccf10ORF19300P | |
| ??? | R | PmeBin658ORFAP (97% identity) | Ccf10ORF19300P | |
| 19360 | orotidine 5-phosphate decarboxylase, subfamily | |||
| 32390 | Site-specific recombinase XerD | |||
| ??? | S | S1.PmeBin70ORFDP (45% identity) | S1.Ccf10ORF32420P | |
| ??? | S | 61 aa hypothetical protein EUBDOL_00356 | S2.Ccf10ORF32420P | |
| 32420 | M | M.AmuNB28ORFDP (95% identity) | M.Ccf10ORF32420P | |
| 32430 | R | Amu30893ORF18860P (88% identity) | Ccf10ORF32420P | |
| 32440 | Uncharacterized conserved protein | |||
| 37340 | Choline-glycine betaine transporter | |||
| ??? | R | PmeBin39ORFFP (26% identity) | Ccf10ORF3750P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4900 | 126 aa hypothetical protein | |||
| 4910 | M | M.PmeBin187ORFCP (66% identity) | M.Ccf10ORF4910P | |
| 4930 | 127 aa hypothetical protein | |||
| 8040 | 163 aa hypothetical protein | |||
| ??? | type II restriction-modification enzyme | |||
| 12580 | VWA domain containing CoxE-like protein. | |||
| ??? | M | M.UbaSM4ORFAP (93% identity) | GATC | M.Ccf10ORF12590P |
| ??? | R | Cse1583ORF6160P (99% identity) | GATC | Ccf10ORF12590P |
| 12610 | cyclopropane-fatty-acyl-phospholipid synthase | |||
| 22080 | 689 aa hypothetical protein | |||
| 22090 | M | M.PmeBin290ORFCP (92% identity) | CCSSGG | M.Ccf10ORF22090P |
| 22130 | 289 aa hypothetical protein | |||
| 23170 | Site-specific recombinases, DNA invertase Pin | |||
| ??? | RM | RM1.UbaSM4ORF14940P (73% identity) | Ccf10ORF23180P | |
| 23200 | Eco57I restriction endonuclease. | |||
| ??? | 246 aa conserved hypothetical protein | |||
| 23200 | RM | LbaGAM79ORFLBP (66% identity) | Ccf10ORF23200P | |
| 23210 | Type III restriction enzyme, res subunit. | |||
| 23200 | Eco57I restriction endonuclease. | |||
| 23210 | RM | UbaSM4ORF14940P (52% identity) | Ccf10ORF23210P | |
| 23240 | Helix-turn-helix. | |||
| 24890 | 117 aa hypothetical protein | |||
| 24910 | M | M.UbaSM4ORFEP (93% identity) | CTSAG | M.Ccf10ORF24910P |
| 24920 | TrbL/VirB6 plasmid conjugal transfer protein. | |||
| 29780 | Site-specific recombinases, DNA invertase Pin | |||
| ??? | M | M.PmeBin308ORFDP (98% identity) | GATC | M.Ccf10ORF29800P |
| 29810 | DNA replication protein | |||
| 29830 | 75 aa hypothetical protein | |||
| 29850 | M | M.RbrL2ORF950P (100% identity) | CCSSGG | M.Ccf10ORF29850P |
| 29870 | Phosphoadenosine phosphosulfate reductase | |||
| 30900 | 175 aa hypothetical protein | |||
| 30910 | C | C.PmeBin99ORFEP (48% identity) | C.Ccf10ORF30910P | |
| 30930 | RNA polymerase sigma factor, sigma-70 family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17940 | MTH538 TIR-like domain (DUF1863). | |||
| 17950 | M | M.PmeBin321ORFAP (88% identity) | M.Ccf10ORF17950P | |
| 17960 | 213 aa hypothetical protein | |||
| 17970 | 150 aa hypothetical protein | |||
| 17980 | R | Msa17ORFB1P (92% identity) | Ccf10ORF17950P | |
| 17990 | Domain of unknown function (DUF1836). | |||
| 30860 | 140 aa hypothetical protein | |||
| 30880 | R | PmeBin179ORFBP (91% identity) | Ccf10ORF30890P | |
| 30890 | M | M.Gbo21714ORF2814P (44% identity) | M.Ccf10ORF30890P | |
| 30900 | 175 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14820 | 28 aa hypothetical protein | |||
| 14830 | R | Cse1583McrB2P (98% identity) | Ccf10McrBP | |
| ??? | R | UbaSM4McrCP (100% identity) | Ccf10McrCP | |
| 14850 | 264 aa hypothetical protein | |||
| 32640 | 116 aa hypothetical protein | |||
| 32650 | R | UbaSM4MrrP (44% identity) | Ccf10MrrP | |
| 32670 | DNA primase (bacterial type) | |||