Eubacterium siraeum V10Sc8a |
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Putative Eubacterium siraeum V10Sc8a RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12145
Complete sequence: 2,836,123 bp
GenBank #: FP929059
REBASE acronym: EsiV
Org_num: 6659
All begin ES1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5020 | 91 aa hypothetical protein | |||
| 5040 | S | S3.Lmu1110ORF6505P (50% identity) | S1.EsiVORF5100P | |
| 5050 | Restriction endonuclease S subunits | |||
| 5060 | 204 aa hypothetical protein | |||
| 5080 | S | S1.Eba2529ORF5330P (53% identity) | S2.EsiVORF5100P | |
| ??? | M | M2.Lmu1110ORF6505P (92% identity) | M2.EsiVORF5100P | |
| 5100 | M | M1.Eba2529ORF5330P (88% identity) | M1.EsiVORF5100P | |
| 5110 | R | Lmu1110ORF6505P (94% identity) | EsiVORF5100P | |
| 5120 | Type I restriction-modification system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 670 | 1103 aa hypothetical protein | |||
| 680 | RM | PmeBin166ORFFP (60% identity) | EsiVORF680AP | |
| 690 | HipA-like C-terminal domain. | |||
| 700 | RM | LsaH1ORF740P (20% identity) | EsiVORF680BP | |
| 710 | 865 aa conserved hypothetical protein TIGR02687 | |||
| 4520 | Predicted transcription factor, homolog of | |||
| ??? | RM | Esi703ORF210P (18% identity) | EsiVORF4540P | |
| 4550 | Predicted transcriptional regulators | |||
| 4850 | 236 aa hypothetical protein | |||
| 4860 | M | M.Cdi27640ORF3509P (94% identity) | M.EsiVORF4860P | |
| 4870 | S-adenosylmethionine synthetase | |||
| 5040 | Restriction endonuclease S subunits | |||
| 5050 | RM | S.Pxy22703ORF7570P (35% identity) | EsiVORF5050P | |
| 5060 | 204 aa hypothetical protein | |||
| 5120 | Type I restriction-modification system | |||
| ??? | RM | M2.BbaOmORF49P (50% identity) | EsiVORF5130P | |
| 5140 | T5orf172 domain. | |||
| ??? | Eco57I restriction endonuclease | |||
| 5140 | RM | PmeBin411ORFAP (54% identity) | EsiVORF5140P | |
| 5160 | ABC-type antimicrobial peptide transport system, | |||
| 12430 | Predicted membrane protein involved in D-alanine | |||
| ??? | M | M.Ssp5C1ORF15500P (52% identity) | GATC | M.EsiVORF12440P |
| 12460 | DGQHR domain | |||
| 13000 | 83 aa hypothetical protein | |||
| ??? | M | DNA-methyltransferase | M.EsiVORF13010P | |
| 13040 | Site-specific DNA methylase | |||
| ??? | DNA-methyltransferase | |||
| 13040 | M | M.Sva1ORF3513P (51% identity) | M.EsiVORF13040P | |
| 13050 | 90 aa hypothetical protein | |||
| 14950 | 283 aa hypothetical protein | |||
| 14960 | M | M.RbrL2ORF920P (100% identity) | GATC | M.EsiVORF14960P |
| 14970 | 130 aa hypothetical protein | |||
| 14970 | 130 aa hypothetical protein | |||
| 14990 | M | M.RbrL2ORF950P (100% identity) | CCSSGG | M.EsiVORF14990P |
| 15010 | Phosphoadenosine phosphosulfate reductase | |||
| 15310 | Antirestriction protein (ArdA). | |||
| 15320 | M | M.PmeBin256ORFBP (99% identity) | M.EsiVORF15320P | |
| 15330 | 118 aa hypothetical protein | |||
| 24110 | 281 aa hypothetical protein | |||
| 24120 | RM | PmeBin166ORFGP (97% identity) | EsiVORF24120P | |
| ??? | S | S.PmeBin166ORFGP (97% identity) | S.EsiVORF24120P | |
| 24140 | 107 aa hypothetical protein | |||