Clostridioides difficile Z1322PCD0001 |
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Putative Clostridioides difficile Z1322PCD0001 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,172,520 bp
GenBank #: CP149711
REBASE acronym: Cdi001
Org_num: 76817
All begin WIR89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2500 | tagatose-bisphosphate aldolase subunit GatY | |||
| 2505 | M | M.PdiZ31ORF1268P (100% identity) | GAANNNNNNRTGC | M.Cdi001ORF2505P |
| 2510 | S | S.CdiEW11I (100% identity) | GAANNNNNNRTGC | S.Cdi001ORF2505P |
| 2515 | 102 aa hypothetical protein | |||
| 2520 | nucleotidyltransferase domain-containing | |||
| 2525 | 142 aa hypothetical protein | |||
| 2530 | R | Cdi269IIP (100% identity) | GAANNNNNNRTGC | Cdi001ORF2505P |
| 2535 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2135 | DrmE family protein | |||
| 2140 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi001ORF2140P |
| 2145 | class B sortase | |||
| 10370 | 65 aa hypothetical protein | |||
| 10375 | M | M.CdiS0352ORF4245P (100% identity) | GATC | M.Cdi001ORF10375P |
| 10380 | 44 aa hypothetical protein | |||
| 18565 | 122 aa hypothetical protein | |||
| 18570 | M | M.Cdi269ORF155P (100% identity) | M.Cdi001ORF18570P | |
| 18575 | 81 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7255 | cell division protein | |||
| 7260 | R | Pdi30McrBP (100% identity) | Cdi001McrBP | |
| 7265 | R | Pdi30McrCP (100% identity) | Cdi001McrCP | |
| 7270 | sigma 54-interacting transcriptional regulator | |||