Clostridioides difficile Z1322PCD0040 |
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Putative Clostridioides difficile Z1322PCD0040 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 3,932,476 bp
GenBank #: CP149686
REBASE acronym: Cdi040
Org_num: 76829
All begin WIS41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14280 | DUF262 domain-containing HNH endonuclease family | |||
| 14285 | R | CdiCd24ORF1400P (100% identity) | CANNNNNNNTAAAG | Cdi040ORF14310P |
| 14290 | 142 aa hypothetical protein | |||
| 14295 | nucleotidyltransferase domain-containing | |||
| 14300 | 102 aa hypothetical protein | |||
| 14305 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi040ORF14310P |
| 14310 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi040ORF14310P |
| 14315 | tagatose-bisphosphate aldolase subunit GatY | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12950 | patatin-like phospholipase family protein | |||
| 12955 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi040ORF12955P |
| 12960 | Rrf2 family transcriptional regulator | |||
| 14710 | 50 aa hypothetical protein | |||
| 14715 | M | M.CdiST42DndCP (100% identity) | M.Cdi040DndCP | |
| 14720 | AAA family ATPase | |||
| 14715 | DNA phosphorothioation system sulfurtransferase | |||
| 14720 | M | M.CdiST42DndDP (100% identity) | M.Cdi040DndDP | |
| 14725 | DndE family protein | |||
| 14720 | AAA family ATPase | |||
| 14725 | M | M.CdiCd24DndEP (100% identity) | M.Cdi040DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 14725 | DndE family protein | |||
| ??? | R | CdiST42DptHP (100% identity) | Cdi040DptHP | |
| 14740 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 14740 | R | CdiST42DptGP (100% identity) | Cdi040DptGP | |
| 14745 | DNA phosphorothioation-dependent restriction | |||
| 14740 | DNA phosphorothioation-dependent restriction | |||
| 14745 | R | CdiST42DptFP (100% identity) | Cdi040DptFP | |
| 14750 | DUF6809 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9235 | sigma 54-interacting transcriptional regulator | |||
| 9240 | R | Cdo002McrCP (100% identity) | Cdi040McrCP | |
| 9245 | R | Pdi6602McrBP (100% identity) | Cdi040McrBP | |
| 9250 | cell division protein | |||