Clostridioides difficile Z1322PCD0061 |
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Putative Clostridioides difficile Z1322PCD0061 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 3,933,565 bp
GenBank #: CP149670
REBASE acronym: Cdi0061
Org_num: 76833
All begin WIS21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3170 | tagatose-bisphosphate aldolase subunit GatY | |||
| 3175 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi0061ORF3175P |
| 3180 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi0061ORF3175P |
| 3185 | 102 aa hypothetical protein | |||
| 3190 | nucleotidyltransferase domain-containing | |||
| 3195 | 142 aa hypothetical protein | |||
| 3200 | R | CdiCd24ORF1400P (100% identity) | CANNNNNNNTAAAG | Cdi0061ORF3175P |
| 3205 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2730 | DUF6809 family protein | |||
| 2735 | R | CdiST42DptFP (100% identity) | Cdi0061DptFP | |
| 2740 | DNA phosphorothioation-dependent restriction | |||
| 2735 | DNA phosphorothioation-dependent restriction | |||
| 2740 | R | CdiST42DptGP (100% identity) | Cdi0061DptGP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 2740 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | CdiST42DptHP (99% identity) | Cdi0061DptHP | |
| 2755 | DndE family protein | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 2755 | M | M.CdiCd24DndEP (100% identity) | M.Cdi0061DndEP | |
| 2760 | AAA family ATPase | |||
| 2755 | DndE family protein | |||
| 2760 | M | M.CdiST42DndDP (100% identity) | M.Cdi0061DndDP | |
| 2765 | DNA phosphorothioation system sulfurtransferase | |||
| 2760 | AAA family ATPase | |||
| 2765 | M | M.CdiST42DndCP (100% identity) | M.Cdi0061DndCP | |
| 2770 | 50 aa hypothetical protein | |||
| 4535 | Rrf2 family transcriptional regulator | |||
| 4540 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi0061ORF4540P |
| 4545 | patatin-like phospholipase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8255 | cell division protein | |||
| 8260 | R | Pdi6602McrBP (100% identity) | Cdi0061McrBP | |
| 8265 | R | Cdo002McrCP (100% identity) | Cdi0061McrCP | |
| 8270 | sigma 54-interacting transcriptional regulator | |||