Clostridioides difficile Z1323HCD0018 |
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Putative Clostridioides difficile Z1323HCD0018 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,065,075 bp
GenBank #: CP149661
REBASE acronym: CdiD0018
Org_num: 76839
All begin WIR59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2665 | tagatose-bisphosphate aldolase subunit GatY | |||
| 2670 | M | M.PdiZ31ORF1268P (100% identity) | GCAYNNNNNNTTC | M.CdiD0018ORF2670P |
| 2675 | S | S.Cdi97ORF16610P (100% identity) | GCAYNNNNNNTTC | S.CdiD0018ORF2670P |
| 2680 | 102 aa hypothetical protein | |||
| 2685 | nucleotidyltransferase domain-containing | |||
| 2690 | 142 aa hypothetical protein | |||
| 2695 | R | Cdi97ORF16610P (100% identity) | GCAYNNNNNNTTC | CdiD0018ORF2670P |
| 2700 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3440 | 91 aa hypothetical protein | |||
| 3445 | M | M.Pdi30ORF7740P (100% identity) | M.CdiD0018ORF3445P | |
| 3450 | 73 aa hypothetical protein | |||
| 4360 | Rrf2 family transcriptional regulator | |||
| 4365 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiD0018ORF4365P |
| 4370 | patatin-like phospholipase family protein | |||
| 10755 | helix-turn-helix transcriptional regulator | |||
| 10760 | R | Cdi80ORFAP (100% identity) | CdiD0018ORF10770P | |
| 10765 | MAE_28990/MAE_18760 family HEPN-like nuclease | |||
| 10770 | M | M.Cdi80ORFAP (100% identity) | M.CdiD0018ORF10770P | |
| 10775 | ImmA/IrrE family metallo-endopeptidase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7850 | cell division protein | |||
| 7855 | R | Cdi97McrBP (100% identity) | CdiD0018McrBP | |
| 7860 | R | Pdi9689McrCP (100% identity) | CdiD0018McrCP | |
| 7865 | sigma 54-interacting transcriptional regulator | |||