Clostridioides difficile Z1323HCD0020 |
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Putative Clostridioides difficile Z1323HCD0020 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,255,987 bp
GenBank #: CP149660
REBASE acronym: Cdi20
Org_num: 76840
All begin WIS05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14410 | DUF262 domain-containing HNH endonuclease family | |||
| 14415 | R | CdiCd24ORF1400P (100% identity) | CANNNNNNNTAAAG | Cdi20ORF14440P |
| 14420 | 142 aa hypothetical protein | |||
| 14425 | nucleotidyltransferase domain-containing | |||
| 14430 | 102 aa hypothetical protein | |||
| 14435 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi20ORF14440P |
| 14440 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi20ORF14440P |
| 14445 | tagatose-bisphosphate aldolase subunit GatY | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13075 | patatin-like phospholipase family protein | |||
| 13080 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi20ORF13080P |
| 13085 | Rrf2 family transcriptional regulator | |||
| 14845 | 50 aa hypothetical protein | |||
| 14850 | M | M.CdiST42DndCP (100% identity) | M.Cdi20DndCP | |
| 14855 | AAA family ATPase | |||
| 14850 | DNA phosphorothioation system sulfurtransferase | |||
| 14855 | M | M.CdiST42DndDP (100% identity) | M.Cdi20DndDP | |
| 14860 | DndE family protein | |||
| 14855 | AAA family ATPase | |||
| 14860 | M | M.CdiCd24DndEP (100% identity) | M.Cdi20DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 14860 | DndE family protein | |||
| ??? | R | CdiST42DptHP (100% identity) | Cdi20DptHP | |
| 14875 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 14875 | R | CdiST42DptGP (100% identity) | Cdi20DptGP | |
| 14880 | DNA phosphorothioation-dependent restriction | |||
| 14875 | DNA phosphorothioation-dependent restriction | |||
| 14880 | R | CdiST42DptFP (100% identity) | Cdi20DptFP | |
| 14885 | DUF6809 family protein | |||
| 16055 | SIR2 family protein | |||
| 16060 | R | Cin14501ORF15235P (100% identity) | CTGCAG | Cdi20ORF16065P |
| 16065 | M | M.Cin14501ORF15235P (99% identity) | CTGCAG | M.Cdi20ORF16065P |
| 16070 | C | C.Ppo4ORF380P (100% identity) | C.Cdi20ORF16065P | |
| 16075 | DNA-binding protein | |||
| 19185 | NlpC/P60 family protein | |||
| 19190 | M | M.Pha7756AORF280P (99% identity) | M.Cdi20ORF19190P | |
| 19195 | DUF87 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9350 | sigma 54-interacting transcriptional regulator | |||
| 9355 | R | Cdo002McrCP (100% identity) | Cdi20McrCP | |
| 9360 | R | Pdi6602McrBP (100% identity) | Cdi20McrBP | |
| 9365 | cell division protein | |||