Clostridioides difficile Z1323HCD0047 |
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Putative Clostridioides difficile Z1323HCD0047 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,087,080 bp
GenBank #: CP149654
REBASE acronym: Cdi47
Org_num: 76843
All begin WIR65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15415 | DUF262 domain-containing HNH endonuclease family | |||
| 15420 | R | CdiCd24ORF1400P (100% identity) | CANNNNNNNTAAAG | Cdi47ORF15445P |
| 15425 | 142 aa hypothetical protein | |||
| 15430 | nucleotidyltransferase domain-containing | |||
| 15435 | 102 aa hypothetical protein | |||
| 15440 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi47ORF15445P |
| 15445 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi47ORF15445P |
| 15450 | tagatose-bisphosphate aldolase subunit GatY | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14085 | patatin-like phospholipase family protein | |||
| 14090 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi47ORF14090P |
| 14095 | Rrf2 family transcriptional regulator | |||
| 15850 | 50 aa hypothetical protein | |||
| 15855 | M | M.CdiST42DndCP (100% identity) | M.Cdi47DndCP | |
| 15860 | AAA family ATPase | |||
| 15855 | DNA phosphorothioation system sulfurtransferase | |||
| 15860 | M | M.CdiST42DndDP (100% identity) | M.Cdi47DndDP | |
| 15865 | DndE family protein | |||
| 15860 | AAA family ATPase | |||
| 15865 | M | M.CdiCd24DndEP (100% identity) | M.Cdi47DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 15865 | DndE family protein | |||
| ??? | R | CdiST42DptHP (100% identity) | Cdi47DptHP | |
| 15880 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 15880 | R | CdiST42DptGP (100% identity) | Cdi47DptGP | |
| 15885 | DNA phosphorothioation-dependent restriction | |||
| 15880 | DNA phosphorothioation-dependent restriction | |||
| 15885 | R | CdiST42DptFP (100% identity) | Cdi47DptFP | |
| 15890 | DUF6809 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10365 | sigma 54-interacting transcriptional regulator | |||
| 10370 | R | Cdo002McrCP (100% identity) | Cdi47McrCP | |
| 10375 | R | Pdi6602McrBP (100% identity) | Cdi47McrBP | |
| 10380 | cell division protein | |||