Clostridioides difficile Z1323HCD0065 |
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Putative Clostridioides difficile Z1323HCD0065 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,073,886 bp
GenBank #: CP149653
REBASE acronym: Cdi065
Org_num: 76844
All begin WIR60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15295 | DUF262 domain-containing HNH endonuclease family | |||
| 15300 | R | CdiCd24ORF1400P (100% identity) | CANNNNNNNTAAAG | Cdi065ORF15325P |
| 15305 | 142 aa hypothetical protein | |||
| 15310 | nucleotidyltransferase domain-containing | |||
| 15315 | 102 aa hypothetical protein | |||
| 15320 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi065ORF15325P |
| 15325 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi065ORF15325P |
| 15330 | tagatose-bisphosphate aldolase subunit GatY | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13965 | patatin-like phospholipase family protein | |||
| 13970 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi065ORF13970P |
| 13975 | Rrf2 family transcriptional regulator | |||
| 15725 | 50 aa hypothetical protein | |||
| 15730 | M | M.CdiST42DndCP (100% identity) | M.Cdi065DndCP | |
| 15735 | AAA family ATPase | |||
| 15730 | DNA phosphorothioation system sulfurtransferase | |||
| 15735 | M | M.CdiST42DndDP (100% identity) | M.Cdi065DndDP | |
| 15740 | DndE family protein | |||
| 15735 | AAA family ATPase | |||
| 15740 | M | M.CdiCd24DndEP (100% identity) | M.Cdi065DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 15740 | DndE family protein | |||
| ??? | R | CdiST42DptHP (100% identity) | Cdi065DptHP | |
| 15755 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 15755 | R | CdiST42DptGP (100% identity) | Cdi065DptGP | |
| 15760 | DNA phosphorothioation-dependent restriction | |||
| 15755 | DNA phosphorothioation-dependent restriction | |||
| 15760 | R | CdiST42DptFP (100% identity) | Cdi065DptFP | |
| 15765 | DUF6809 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10255 | sigma 54-interacting transcriptional regulator | |||
| 10260 | R | Cdo002McrCP (100% identity) | Cdi065McrCP | |
| 10265 | R | Pdi6602McrBP (100% identity) | Cdi065McrBP | |
| 10270 | cell division protein | |||