Clostridioides difficile Z1322HCD0006 |
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Putative Clostridioides difficile Z1322HCD0006 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,091,965 bp
GenBank #: CP149762
REBASE acronym: Cdi06
Org_num: 76794
All begin WIS15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14525 | DUF262 domain-containing HNH endonuclease family | |||
| 14530 | R | CdiCd24ORF1400P (100% identity) | CANNNNNNNTAAAG | Cdi06ORF14555P |
| 14535 | 142 aa hypothetical protein | |||
| 14540 | nucleotidyltransferase domain-containing | |||
| 14545 | 102 aa hypothetical protein | |||
| 14550 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi06ORF14555P |
| 14555 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi06ORF14555P |
| 14560 | tagatose-bisphosphate aldolase subunit GatY | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13195 | patatin-like phospholipase family protein | |||
| 13200 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi06ORF13200P |
| 13205 | Rrf2 family transcriptional regulator | |||
| 14955 | 50 aa hypothetical protein | |||
| 14960 | M | M.CdiST42DndCP (100% identity) | M.Cdi06DndCP | |
| 14965 | AAA family ATPase | |||
| 14960 | DNA phosphorothioation system sulfurtransferase | |||
| 14965 | M | M.CdiST42DndDP (100% identity) | M.Cdi06DndDP | |
| 14970 | DndE family protein | |||
| 14965 | AAA family ATPase | |||
| 14970 | M | M.CdiCd24DndEP (100% identity) | M.Cdi06DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 14970 | DndE family protein | |||
| ??? | R | CdiST42DptHP (100% identity) | Cdi06DptHP | |
| 14985 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 14985 | R | CdiST42DptGP (100% identity) | Cdi06DptGP | |
| 14990 | DNA phosphorothioation-dependent restriction | |||
| 14985 | DNA phosphorothioation-dependent restriction | |||
| 14990 | R | CdiST42DptFP (100% identity) | Cdi06DptFP | |
| 14995 | DUF6809 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9475 | sigma 54-interacting transcriptional regulator | |||
| 9480 | R | Cdo002McrCP (100% identity) | Cdi06McrCP | |
| 9485 | R | Pdi6602McrBP (100% identity) | Cdi06McrBP | |
| 9490 | cell division protein | |||