Clostridioides difficile Z1322HCD0038 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridioides difficile Z1322HCD0038 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,116,481 bp
GenBank #: CP149747
REBASE acronym: Cdi38
Org_num: 76799
All begin WIR91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15540 | DUF262 domain-containing HNH endonuclease family | |||
| 15545 | R | CdiCd24ORF1400P (99% identity) | CANNNNNNNTAAAG | Cdi38ORF15570P |
| 15550 | 142 aa hypothetical protein | |||
| 15555 | nucleotidyltransferase domain-containing | |||
| 15560 | 102 aa hypothetical protein | |||
| 15565 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi38ORF15570P |
| 15570 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi38ORF15570P |
| 15575 | tagatose-bisphosphate aldolase subunit GatY | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14210 | patatin-like phospholipase family protein | |||
| 14215 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi38ORF14215P |
| 14220 | Rrf2 family transcriptional regulator | |||
| 15970 | 50 aa hypothetical protein | |||
| 15975 | M | M.CdiST42DndCP (100% identity) | M.Cdi38DndCP | |
| 15980 | AAA family ATPase | |||
| 15975 | DNA phosphorothioation system sulfurtransferase | |||
| 15980 | M | M.CdiST42DndDP (100% identity) | M.Cdi38DndDP | |
| 15985 | DndE family protein | |||
| 15980 | AAA family ATPase | |||
| 15985 | M | M.CdiCd24DndEP (100% identity) | M.Cdi38DndEP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 15985 | DndE family protein | |||
| ??? | R | CdiST42DptHP (100% identity) | Cdi38DptHP | |
| 16000 | DNA phosphorothioation-dependent restriction | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 16000 | R | CdiST42DptGP (100% identity) | Cdi38DptGP | |
| 16005 | DNA phosphorothioation-dependent restriction | |||
| 16000 | DNA phosphorothioation-dependent restriction | |||
| 16005 | R | CdiST42DptFP (100% identity) | Cdi38DptFP | |
| 16010 | DUF6809 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10495 | sigma 54-interacting transcriptional regulator | |||
| 10500 | R | Cdo002McrCP (100% identity) | Cdi38McrCP | |
| 10505 | R | Pdi6602McrBP (100% identity) | Cdi38McrBP | |
| 10510 | cell division protein | |||