Isosphaera pallida ATCC 43644 |
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Putative Isosphaera pallida ATCC 43644 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14289
Complete sequence: 5,472,964 bp
GenBank #: CP002353 (NC_014962)
REBASE acronym: Ipa43644
Org_num: 6634
All begin Isop_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 387 | 184 aa hypothetical protein | |||
| 388 | M | M.PbaE1PORF14580P (54% identity) | M.Ipa43644ORF388P | |
| 389 | repeat-companion domain protein | |||
| 1323 | HAD-superfamily hydrolase, subfamily IA, variant | |||
| 1324 | RM | Kra44963ORF808P (22% identity) | Ipa43644ORF1324P | |
| 1325 | DNA polymerase III, alpha subunit | |||
| 2070 | Alcohol dehydrogenase GroES domain protein | |||
| 2071 | M | M.Csp2098ORF13280P (49% identity) | TCCGGA | M.Ipa43644ORF2071P |
| 2072 | Methyltransferase type 11 | |||
| 2293 | cysteine synthase | |||
| 2294 | M | M.Sac18658ORFBP (32% identity) | TTCGAA | M.Ipa43644ORF2294P |
| 2295 | Mov34/MPN/PAD-1 family protein | |||
| 2444 | Bifunctional DNA primase/polymerase | |||
| 2445 | M | M.TspSP2TORF26360P (67% identity) | M.Ipa43644ORF2445P | |
| 2446 | 159 aa hypothetical protein | |||
| 2678 | heme-binding protein | |||
| ??? | M | M.AteNZORF5390P (54% identity) | GAATTC | M.Ipa43644ORF2679P |
| 2680 | 282 aa hypothetical protein | |||
| 3293 | ATP-dependent DNA helicase, RecQ family | |||
| 3294 | M | M.Aba19ORF12130P (65% identity) | TTAA | M.Ipa43644ORF3294P |
| 3295 | DNA photolyase FAD-binding protein | |||
| 3373 | protein of unknown function DUF433 | |||
| 3374 | M | M.Lsp15MVORFDP (48% identity) | M.Ipa43644ORF3374P | |
| 3375 | helicase domain protein | |||
| 3556 | Aldehyde Dehydrogenase | |||
| 3557 | M | M.Hri593ORF20840P (69% identity) | M.Ipa43644ORF3557P | |
| 3558 | Cytochrome-c peroxidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3375 | helicase domain protein | |||
| 3376 | R | Rsp98ORF8250P (71% identity) | Ipa43644ORF3377P | |
| 3377 | M | M.MmaLYCORF2622P (16% identity) | M.Ipa43644ORF3377P | |
| 3378 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 48 | 506 aa hypothetical protein | |||
| 49 | R | Zfo19928McrBP (17% identity) | Ipa43644McrBP | |
| 50 | 541 aa hypothetical protein | |||
| 1418 | 611 aa hypothetical protein | |||
| 1419 | R | 904 aa hypothetical protein | Ipa43644McrB2P | |
| 1420 | glucosamine/galactosamine-6-phosphate isomerase | |||
| 3367 | 34 aa hypothetical protein | |||
| 3368 | R | PspPL62MrrP (58% identity) | Ipa43644MrrP | |
| 3370 | 489 aa hypothetical protein | |||