Escherichia coli Z1323HEC0393 |
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Putative Escherichia coli Z1323HEC0393 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 5,293,221 bp
GenBank #: CP148357
REBASE acronym: Eco0393
Org_num: 76894
All begin WHU04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20610 | endoribonuclease SymE | |||
| 20615 | R | SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | Eco0393ORF20625P |
| 20620 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.Eco0393ORF20625P |
| 20625 | M | M.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | M.Eco0393ORF20625P |
| 20630 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1735 | TrmB family transcriptional regulator | |||
| 1740 | M | M.EcoH117ORF6080P (100% identity) | M.Eco0393ORF1740P | |
| 1745 | type II toxin-antitoxin system RelE/ParE family | |||
| 6140 | 39 aa hypothetical protein | |||
| 6160 | M | M.EcoDEC5BORF2703P (98% identity) | A | M.Eco0393ORF6160P |
| 6165 | TrmB family transcriptional regulator | |||
| 6735 | drug/metabolite exporter YedA | |||
| 6740 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco0393DcmP |
| 6745 | M | M.SspPIBDcmP (100% identity) | CCWGG | M.Eco0393DcmP |
| 6750 | phosphohydrolase | |||
| 6975 | anti-adapter protein IraM | |||
| 6980 | M | M.Eco87042ORFGP (100% identity) | M1.Eco0393ORF6980P | |
| 6985 | TrmB family transcriptional regulator | |||
| 6990 | DUF1133 family protein | |||
| 6995 | RusA family crossover junction | |||
| 7000 | DUF968 domain-containing protein | |||
| 7005 | 90 aa hypothetical protein | |||
| 7010 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco0393ORF6980P |
| 7015 | M | M.Eco14361ORF14765P (100% identity) | GCCGGC | M2.Eco0393ORF6980P |
| 7020 | epoxyqueuosine reductase QueH | |||
| 9685 | NinE family protein | |||
| 9690 | M | M.Eph2012ORF32P (100% identity) | GATC | M.Eco0393ORF9690P |
| 9695 | recombination protein NinB | |||
| 14740 | site-specific integrase | |||
| 14745 | M | M.Ecod6c8ORFAP (100% identity) | ATGCAT | M.Eco0393ORF14745P |
| 14750 | DUF2556 family protein | |||
| 15305 | ribulose-phosphate 3-epimerase | |||
| 15310 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0393DamP |
| 15315 | cell division protein DamX | |||
| 24900 | 219 aa hypothetical protein | |||
| 24905 | RM | EcoSO40ORF8270P (100% identity) | Eco0393ORF24905P | |
| 24910 | S | S.EcoS792ORF8800P (100% identity) | S.Eco0393ORF24905P | |
| 24915 | DNA methylase | |||
| 26310 | TrmB family transcriptional regulator | |||
| 26315 | M | M.Eco87042ORFIP (100% identity) | M.Eco0393ORF26315P | |
| 26320 | type II toxin-antitoxin system RelE/ParE family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20625 | class I SAM-dependent DNA methyltransferase | |||
| 20630 | R | SflSTLE3MrrP (99% identity) | Eco0393MrrP | |
| 20635 | BrnT family toxin | |||