Escherichia coli Z1323PEC0001 |
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Putative Escherichia coli Z1323PEC0001 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 4,999,437 bp | CP148312 |
| plasmid pZ1323PEC0001-2: | 91,752 bp | CP148313 |
REBASE acronym: EcoPEC0001
Org_num: 76902
All begin WHU69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5760 | adenine/cytosine-specific restriction | |||
| 5765 | R | Ecos15955ORF12100P (99% identity) | RTCANNNNNNNCTTC | EcoPEC0001ORF5770P |
| 5770 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.EcoPEC0001ORF5770P |
| 5775 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.EcoPEC0001ORF5770P |
| 5780 | endoribonuclease SymE | |||
| plasmid pZ1323PEC0001-2 | ||||
| 25270 | type II toxin-antitoxin system Phd/YefM family | |||
| 25275 | M | M.EcoCEC0011ORF27855P (100% identity) | M.EcoPEC0001ORF25275P | |
| 25280 | S | S.EcoCEC0011ORF27855P (99% identity) | S.EcoPEC0001ORF25275P | |
| 25285 | R | EcoCEC0011ORF27855P (99% identity) | EcoPEC0001ORF25275P | |
| 25290 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 210 | 84 aa hypothetical protein | |||
| 215 | M | M.EcoC0008ORF8740P (100% identity) | M.EcoPEC0001ORF215P | |
| 220 | DUF977 family protein | |||
| 975 | replication endonuclease | |||
| 980 | M | M.EcoE2aORF7785P (100% identity) | GATC | M.EcoPEC0001ORF980P |
| 985 | TraR/DksA family transcriptional regulator | |||
| 4625 | recombination protein NinB | |||
| 4630 | M | M.EcoE2aORF4145P (100% identity) | GATC | M.EcoPEC0001ORF4630P |
| 4635 | NinE family protein | |||
| 8690 | IS21-like element ISEc12 family transposase | |||
| 8695 | M | M.EcoSCU109ORF25P (100% identity) | M.EcoPEC0001ORF8695P | |
| 8700 | 282 aa hypothetical protein | |||
| 11460 | cell division protein DamX | |||
| 11465 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPEC0001DamP |
| 11470 | ribulose-phosphate 3-epimerase | |||
| 12085 | DUF2556 family protein | |||
| 12090 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoPEC0001ORF12090P |
| 12095 | DNA-binding transcriptional regulator Fis | |||
| 18675 | recombination protein NinB | |||
| 18680 | M | M.EcoCEC0011ORF16200P (100% identity) | GATC | M.EcoPEC0001ORF18680P |
| 18685 | NinE family protein | |||
| 19570 | phosphohydrolase | |||
| 19575 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoPEC0001DcmP |
| 19580 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoPEC0001DcmP |
| 19585 | drug/metabolite exporter YedA | |||
| 21570 | IS3 family transposase | |||
| 21575 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoPEC0001ORF21575P | |
| 21580 | 60 aa hypothetical protein | |||
| 24875 | NinE family protein | |||
| 24880 | M | M.EcoE2aORF9040P (100% identity) | GATC | M.EcoPEC0001ORF24880P |
| 24885 | recombination protein NinB | |||
| plasmid pZ1323PEC0001-2 | ||||
| 25380 | SPFH domain-containing protein | |||
| 25400 | M | M.EcoCEC0011ORF27975P (99% identity) | M.EcoPEC0001ORF25400P | |
| 25405 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5755 | GTPase | |||
| 5760 | R | Ssp28760MrrP (99% identity) | EcoPEC0001MrrP | |
| 5765 | type I restriction-modification system | |||
| 23700 | isocitrate/isopropylmalate family dehydrogenase | |||
| 23705 | R | Ecos15955McrCP (99% identity) | EcoPEC0001McrCP | |
| 23710 | R | EcoCEC0011McrBP (100% identity) | EcoPEC0001McrBP | |
| 23715 | tail fiber assembly protein | |||