Escherichia coli Z1323PEC0013 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Z1323PEC0013 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 4,749,416 bp | CP148269 |
| plasmid pZ1323PEC0013-2: | 92,350 bp | CP148270 |
| plasmid pZ1323PEC0013-4: | 53,797 bp | CP148272 |
REBASE acronym: Eco0013
Org_num: 76914
All begin WHT88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2515 | endoribonuclease SymE | |||
| 2520 | S | S.SflFF12ORF17265P (100% identity) | CATNNNNNNCTCC | S.Eco0013ORF2525P |
| 2525 | M | M.SflFF12ORF17265P (100% identity) | CATNNNNNNCTCC | M.Eco0013ORF2525P |
| 2530 | R | Ecos671ORFCP (100% identity) | CATNNNNNNCTCC | Eco0013ORF2525P |
| 2535 | adenine/cytosine-specific restriction | |||
| 16660 | IS3 family transposase | |||
| 16665 | M | M.EcoSCU118ORF5500P (100% identity) | M.Eco0013ORF16665P | |
| 16670 | S | S.EcoSCU118ORF5500P (100% identity) | S.Eco0013ORF16665P | |
| 16675 | R | Ror24150ORF17255P (100% identity) | Eco0013ORF16665P | |
| 16680 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4230 | 257 aa hypothetical protein | |||
| 4235 | M | M.EcoYPE3ORF18250P (100% identity) | M.Eco0013ORF4235P | |
| 4240 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco0013ORF4235P |
| 4245 | Arm DNA-binding domain-containing protein | |||
| 13140 | drug/metabolite exporter YedA | |||
| 13145 | V | V.SflN116DcmP (100% identity) | CCWGG | V.Eco0013DcmP |
| 13150 | M | M.SflN116DcmP (100% identity) | CCWGG | M.Eco0013DcmP |
| 13155 | phosphohydrolase | |||
| 19905 | DNA-binding transcriptional regulator Fis | |||
| 19910 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco0013ORF19910P |
| 19915 | DUF2556 family protein | |||
| 20535 | ribulose-phosphate 3-epimerase | |||
| 20540 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco0013DamP |
| 20545 | cell division protein DamX | |||
| plasmid pZ1323PEC0013-2 | ||||
| 23665 | 75 aa hypothetical protein | |||
| 23670 | M | M.Xca80ORFEP (100% identity) | M.Eco0013ORF23670P | |
| 23675 | 73 aa hypothetical protein | |||
| plasmid pZ1323PEC0013-4 | ||||
| 24620 | group II intron reverse transcriptase/maturase | |||
| 24625 | M | M.SflP099ORF24190P (89% identity) | M.Eco0013ORF24625P | |
| 24630 | 45 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2530 | type I restriction-modification system | |||
| 2535 | R | Ssp28760MrrP (100% identity) | Eco0013MrrP | |
| 2540 | GTPase | |||