Escherichia coli Z1323CEC0009 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Z1323CEC0009 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,430,788 bp | CP148453 |
| plasmid pZ1323CEC0009-2: | 80,176 bp | CP148454 |
REBASE acronym: EcoC0009
Org_num: 76639
All begin WHU68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3350 | 63 aa hypothetical protein | |||
| 3355 | R | EcoEC0016ORF3390P (100% identity) | EcoC0009ORF3365P | |
| 3360 | S | S.EcoEC0016ORF3390P (100% identity) | S.EcoC0009ORF3365P | |
| 3365 | M | M.EcoCEC0001ORF3370P (100% identity) | M.EcoC0009ORF3365P | |
| 3370 | GTPase family protein | |||
| 10245 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.EcoC0009ORF10245P |
| 10250 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.EcoC0009ORF10245P |
| 10255 | restriction system-associated AAA family ATPase | |||
| 11190 | 410 aa hypothetical protein | |||
| 11195 | M | M.Ero309ORF14810P (100% identity) | M.EcoC0009ORF11195P | |
| 11200 | S | S.EcoPK8241ORF9245P (100% identity) | S.EcoC0009ORF11195P | |
| 11205 | YecA family protein | |||
| 11210 | R | EcoPK8241ORF9245P (100% identity) | EcoC0009ORF11195P | |
| 11215 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1690 | cell division protein DamX | |||
| 1695 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0009DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC0009ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 7155 | HNH endonuclease | |||
| 7160 | M | M.EcoEC0016ORF7190P (100% identity) | M.EcoC0009ORF7160P | |
| 7165 | NinE family protein | |||
| 8950 | recombination protein NinB | |||
| 8955 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoC0009ORF8955P |
| 8960 | NinE family protein | |||
| 9640 | recombination protein NinB | |||
| 9645 | M | M.EcoEC0016ORF9665P (100% identity) | GATC | M.EcoC0009ORF9645P |
| 9650 | NinE family protein | |||
| 10610 | TrmB family transcriptional regulator | |||
| 10615 | M | M.EcoS7005ORFLP (100% identity) | M.EcoC0009ORF10615P | |
| 10635 | 39 aa hypothetical protein | |||
| 10880 | phosphohydrolase | |||
| 10885 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoC0009DcmP |
| 10890 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoC0009DcmP |
| 10895 | drug/metabolite exporter YedA | |||
| 16020 | class II holin family protein | |||
| 16025 | M | M.EcoCEC0001ORF17785P (99% identity) | M.EcoC0009ORF16025P | |
| 16030 | TrmB family transcriptional regulator | |||
| 17350 | NinE family protein | |||
| 17355 | M | M.EcoEC0016ORF7190P (100% identity) | M.EcoC0009ORF17355P | |
| 17360 | HNH endonuclease | |||
| 17825 | class II holin family protein | |||
| 17850 | M | M.EcoPK8241ORF3025P (100% identity) | M.EcoC0009ORF17850P | |
| 17855 | TrmB family transcriptional regulator | |||
| 19250 | NinE family protein | |||
| 19255 | M | M.EcoEC0016ORF19305P (100% identity) | GATC | M.EcoC0009ORF19255P |
| 19260 | recombination protein NinB | |||
| plasmid pZ1323CEC0009-2 | ||||
| 27880 | 103 aa hypothetical protein | |||
| 27885 | M | M.Eho4ORF23420P (100% identity) | M.EcoC0009ORF27885P | |
| 27890 | 73 aa hypothetical protein | |||