Escherichia coli Z1323CEC0017 |
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Putative Escherichia coli Z1323CEC0017 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,201,036 bp | CP148409 |
| plasmid pZ1323CEC0017-2: | 103,492 bp | CP148410 |
REBASE acronym: EcoC0017
Org_num: 76631
All begin WHU09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5365 | SprT family zinc-dependent metalloprotease | |||
| 5370 | R | EcoF637ORF18210P (99% identity) | EcoC0017ORF5385P | |
| 5375 | YecA family protein | |||
| 5380 | S | S.EcoCP61ORF17550P (100% identity) | S.EcoC0017ORF5385P | |
| 5385 | M | M.EcoCP61ORF17550P (100% identity) | M.EcoC0017ORF5385P | |
| 5390 | 410 aa hypothetical protein | |||
| 20680 | adenine/cytosine-specific restriction | |||
| 20685 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | EcoC0017ORF20690P |
| 20690 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.EcoC0017ORF20690P |
| 20695 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.EcoC0017ORF20690P |
| 20700 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3585 | 60 aa hypothetical protein | |||
| 3590 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoC0017ORF3590P | |
| 3595 | IS3 family transposase | |||
| 5725 | drug/metabolite exporter YedA | |||
| 5730 | V | V.Ecos195DcmP (100% identity) | V.EcoC0017DcmP | |
| 5735 | M | M.EcoLR641DcmP (100% identity) | CCWGG | M.EcoC0017DcmP |
| 5740 | phosphohydrolase | |||
| 6370 | NinE family protein | |||
| 6375 | M | M.EcoS944ORF17230P (100% identity) | M.EcoC0017ORF6375P | |
| 6380 | HNH endonuclease signature motif containing | |||
| 14140 | RusA family crossover junction | |||
| 14145 | M | M.EcoE2aORF950P (100% identity) | GATC | M.EcoC0017ORF14145P |
| 14150 | 28 aa hypothetical protein | |||
| 17615 | cell division protein DamX | |||
| 17620 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0017DamP |
| 17625 | ribulose-phosphate 3-epimerase | |||
| 18240 | DUF2556 family protein | |||
| 18245 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoC0017ORF18245P |
| 18250 | DNA-binding transcriptional regulator Fis | |||
| 21055 | NinE family protein | |||
| 21060 | M | M.EcoPEC0001ORF4630P (100% identity) | GATC | M.EcoC0017ORF21060P |
| 21065 | recombination protein NinB | |||
| 21810 | integrase arm-type DNA-binding domain-containing | |||
| 21815 | M | M.KpnFF77ORF20840P (100% identity) | GGTACC | M.EcoC0017ORF21815P |
| 21820 | zinc ribbon domain-containing protein | |||
| 21850 | BREX system P-loop protein BrxC | |||
| 21855 | RM | EcoPSJ42ORF40060P (100% identity) | CANCATC | EcoC0017ORF21855P |
| 21860 | BREX-1 system phosphatase PglZ type A | |||
| 24705 | TraR/DksA family transcriptional regulator | |||
| 24710 | M | M.EcoPEC0001ORF980P (100% identity) | GATC | M.EcoC0017ORF24710P |
| 24715 | replication endonuclease | |||
| 25545 | TrmB family transcriptional regulator | |||
| 25550 | M | M.EcoPK8241ORF4525P (99% identity) | M.EcoC0017ORF25550P | |
| 25555 | class II holin family protein | |||
| 25975 | recombination protein NinB | |||
| 25980 | M | M.EcoPEC0001ORF24880P (100% identity) | GATC | M.EcoC0017ORF25980P |
| 25985 | NinE family protein | |||
| plasmid pZ1323CEC0017-2 | ||||
| 26290 | 103 aa hypothetical protein | |||
| 26295 | M | M.EcoE2aORF26760P (100% identity) | SAY | M.EcoC0017ORF26295P |
| 26300 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1455 | tail fiber assembly protein | |||
| 1460 | R | Ecos15955McrBP (100% identity) | EcoC0017McrBP | |
| 1465 | R | Ecos15955McrCP (95% identity) | EcoC0017McrCP | |
| 1470 | isocitrate/isopropylmalate family dehydrogenase | |||
| 20675 | GTPase | |||
| 20680 | R | Ssp28760MrrP (100% identity) | EcoC0017MrrP | |
| 20685 | type I restriction-modification system | |||