Escherichia coli Z1323CEC0005 |
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Putative Escherichia coli Z1323CEC0005 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,409,140 bp | CP148474 |
| plasmid pZ1323CEC0005_1-2: | 104,495 bp | CP148475 |
| plasmid pZ1323CEC0005_1-3: | 68,271 bp | CP148476 |
| plasmid pZ1323CEC0005_1-4: | 44,310 bp | CP148477 |
| plasmid pZ1323CEC0005_1-7: | 8,213 bp | CP148480 |
REBASE acronym: EcoEC0005
Org_num: 76643
All begin WHU53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19000 | IS66 family transposase | |||
| 19005 | S | S2.EcoUM1886ORF17525P (100% identity) | S2.EcoEC0005ORF19030P | |
| 19010 | R | EcoUM1886ORF17525P (100% identity) | EcoEC0005ORF19030P | |
| 19015 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 19020 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 19025 | S | S1.EcoUM1886ORF17525P (99% identity) | YTCANNNNNNGTNG | S1.EcoEC0005ORF19030P |
| 19030 | M | M.EcoW14588ORF21505P (100% identity) | M.EcoEC0005ORF19030P | |
| 19035 | 58 aa hypothetical protein | |||
| 20580 | IS66 family transposase | |||
| 20585 | S | S2.EcoUM1886ORF17525P (100% identity) | S2.EcoEC0005ORF20610P | |
| 20590 | R | EcoUM1886ORF17525P (100% identity) | EcoEC0005ORF20610P | |
| 20595 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 20600 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 20605 | S | S1.EcoUM1886ORF17525P (99% identity) | YTCANNNNNNGTNG | S1.EcoEC0005ORF20610P |
| 20610 | M | M.EcoW14588ORF21505P (100% identity) | M.EcoEC0005ORF20610P | |
| 20615 | 58 aa hypothetical protein | |||
| 26060 | SprT family zinc-dependent metalloprotease | |||
| 26065 | R | EcoPK8241ORF9245P (100% identity) | EcoEC0005ORF26080P | |
| 26070 | YecA family protein | |||
| 26075 | S | S.EcoPK8241ORF9245P (100% identity) | S.EcoEC0005ORF26080P | |
| 26080 | M | M.Ero309ORF14810P (100% identity) | M.EcoEC0005ORF26080P | |
| 26085 | 390 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 660 | NinE family protein | |||
| 665 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoEC0005ORF665P |
| 670 | recombination protein NinB | |||
| 5950 | BREX-1 system phosphatase PglZ type A | |||
| 5955 | RM | EcoP19598ORF21290P (100% identity) | EcoEC0005ORF5955P | |
| 5960 | BREX system P-loop protein BrxC | |||
| 7080 | DNA-binding transcriptional regulator Fis | |||
| 7085 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoEC0005ORF7085P |
| 7090 | DUF2556 family protein | |||
| 7715 | ribulose-phosphate 3-epimerase | |||
| 7720 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEC0005DamP |
| 7725 | cell division protein DamX | |||
| 11425 | recombination protein NinB | |||
| 11430 | M | M.EcoEC0016ORF9665P (100% identity) | GATC | M.EcoEC0005ORF11430P |
| 11435 | NinE family protein | |||
| 15620 | HNH endonuclease | |||
| 15625 | M | M.EcoC0006ORF21670P (100% identity) | M.EcoEC0005ORF15625P | |
| 15630 | NinE family protein | |||
| 15665 | TrmB family transcriptional regulator | |||
| 15670 | M | M.EcoPK8241ORF4525P (100% identity) | M.EcoEC0005ORF15670P | |
| 15675 | class II holin family protein | |||
| 19695 | IS21-like element ISSso4 family helper ATPase | |||
| 19700 | M | M.EcoPK8241ORF3025P (100% identity) | M.EcoEC0005ORF19700P | |
| 19725 | class II holin family protein | |||
| 21315 | TrmB family transcriptional regulator | |||
| 21320 | M | M.EcoPK8241ORF4525P (100% identity) | M.EcoEC0005ORF21320P | |
| 21325 | class II holin family protein | |||
| 26400 | drug/metabolite exporter YedA | |||
| 26405 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoEC0005DcmP |
| 26410 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoEC0005DcmP |
| 26415 | phosphohydrolase | |||
| 26675 | 39 aa hypothetical protein | |||
| 26695 | M | M.EcoS7005ORFLP (100% identity) | M.EcoEC0005ORF26695P | |
| 26700 | TrmB family transcriptional regulator | |||
| plasmid pZ1323CEC0005_1-2 | ||||
| 27530 | recombination-associated protein RdgC | |||
| 27535 | M | M.EcoPK8241ORF24920P (100% identity) | M.EcoEC0005ORF27535P | |
| 27540 | RNA-guided endonuclease TnpB family protein | |||
| 27645 | 53 aa hypothetical protein | |||
| 27650 | M | M.EcoPK8241ORF24805P (100% identity) | M.EcoEC0005ORF27650P | |
| 27655 | ead/Ea22-like family protein | |||
| plasmid pZ1323CEC0005_1-3 | ||||
| 28365 | 103 aa hypothetical protein | |||
| 28370 | M | M.EcoO26ORF11P (99% identity) | M.EcoEC0005ORF28370P | |
| 28375 | 73 aa hypothetical protein | |||
| plasmid pZ1323CEC0005_1-4 | ||||
| 28660 | 103 aa hypothetical protein | |||
| 28665 | M | M.Eho4ORF23420P (100% identity) | M.EcoEC0005ORF28665P | |
| 28670 | 73 aa hypothetical protein | |||
| plasmid pZ1323CEC0005_1-7 | ||||
| 29005 | MbeD family mobilization/exclusion protein | |||
| 29010 | M | M.EcoC0006ORF29080P (100% identity) | CCNGG | M.EcoEC0005ORF29010P |
| 29015 | R | EcoC0006ORF29080P (100% identity) | CCNGG | EcoEC0005ORF29010P |
| 29020 | IS21-like element ISSso4 family helper ATPase | |||