Escherichia coli Z1323CEC0002 |
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Putative Escherichia coli Z1323CEC0002 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,266,209 bp | CP148498 |
| plasmid pZ1323CEC0002-2: | 100,054 bp | CP148499 |
| plasmid pZ1323CEC0002-4: | 5,650 bp | CP148501 |
REBASE acronym: Eco002
Org_num: 76646
All begin WHU64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9920 | inverse autotransporter beta domain-containing | |||
| 9925 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.Eco002ORF9925P |
| 9930 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.Eco002ORF9925P |
| 9935 | restriction system-associated AAA family ATPase | |||
| 10970 | 128 aa hypothetical protein | |||
| 10975 | M | M.EcoVEF10ORF18030P (100% identity) | M.Eco002ORF10975P | |
| 10980 | S | S1.EcoVEF10ORF18030P (100% identity) | S1.Eco002ORF10975P | |
| 10985 | YecA family protein | |||
| 10990 | cold shock domain-containing protein | |||
| 10995 | R | EcoVEF10ORF18030P (100% identity) | Eco002ORF10975P | |
| 11000 | S | S2.Ecoa005ORF12540P (100% identity) | S2.Eco002ORF10975P | |
| 11005 | IS1-like element transposase | |||
| 23975 | lactate utilization protein C | |||
| 23980 | R | EcoEC107ORF17490P (100% identity) | Eco002ORF23990P | |
| 23985 | S | S.EcoEC107ORF17490P (100% identity) | S.Eco002ORF23990P | |
| 23990 | M | M.SflFF80ORF4075P (100% identity) | M.Eco002ORF23990P | |
| 23995 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2430 | DUF2556 family protein | |||
| 2435 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco002ORF2435P |
| 2440 | DNA-binding transcriptional regulator Fis | |||
| 8645 | recombination protein NinB | |||
| 8650 | M | M.EcoCEC0001ORF9655P (100% identity) | GATC | M.Eco002ORF8650P |
| 8655 | NinE family protein | |||
| 10310 | TrmB family transcriptional regulator | |||
| 10315 | M | M.EcoS7005ORFLP (100% identity) | M.Eco002ORF10315P | |
| 10335 | 39 aa hypothetical protein | |||
| 10625 | hydrolase | |||
| 10630 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco002DcmP |
| 10635 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco002DcmP |
| 10640 | drug/metabolite exporter YedA | |||
| 15940 | phage lysis protein EssD | |||
| 15945 | M | M.EcoEC0016ORF16045P (100% identity) | M.Eco002ORF15945P | |
| 15950 | TrmB family transcriptional regulator | |||
| 17120 | recombination protein NinB | |||
| 17125 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.Eco002ORF17125P |
| 17130 | NinE family protein | |||
| plasmid pZ1323CEC0002-2 | ||||
| 26705 | 103 aa hypothetical protein | |||
| 26710 | M | M.EcoSCU488ORF25195P (100% identity) | M.Eco002ORF26710P | |
| 26715 | 73 aa hypothetical protein | |||
| plasmid pZ1323CEC0002-4 | ||||
| 27435 | MbeD family mobilization/exclusion protein | |||
| 27440 | M | M.EcoH591ORF4942P (100% identity) | GGYRCC | M.Eco002ORF27440P |
| 27445 | R | SenUA39ORF5P (100% identity) | GGYRCC | Eco002ORF27440P |