Escherichia coli Z1323HEC0011 |
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Putative Escherichia coli Z1323HEC0011 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,642,256 bp
GenBank #: CP148385
REBASE acronym: EcoEC0011
Org_num: 76626
All begin WHU55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19500 | adenine/cytosine-specific restriction | |||
| 19505 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | EcoEC0011ORF19510P |
| 19510 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.EcoEC0011ORF19510P |
| 19515 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.EcoEC0011ORF19510P |
| 19520 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1640 | cell division protein DamX | |||
| 1645 | M | M.EcoR25DamP (100% identity) | GATC | M.EcoEC0011DamP |
| 1650 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoEC0011ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 9040 | phosphohydrolase | |||
| 9045 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoEC0011DcmP |
| 9050 | V | V.EcosPA11DcmP (100% identity) | V.EcoEC0011DcmP | |
| 9055 | drug/metabolite exporter YedA | |||
| 11015 | IS3 family transposase | |||
| 11020 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoEC0011ORF11020P | |
| 11025 | 60 aa hypothetical protein | |||
| 14940 | replication endonuclease | |||
| 14945 | M | M.EcoSCU105ORF16410P (100% identity) | GATC | M.EcoEC0011ORF14945P |
| 14950 | TraR/DksA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13060 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13065 | R | Ecos15955McrCP (95% identity) | EcoEC0011McrCP | |
| 13070 | R | Ecos15955McrBP (100% identity) | EcoEC0011McrBP | |
| 13075 | tail fiber assembly protein | |||
| 19495 | GTPase | |||
| 19500 | R | Ssp28760MrrP (100% identity) | EcoEC0011MrrP | |
| 19505 | type I restriction-modification system | |||