Escherichia coli Z1322HEC0001 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Z1322HEC0001 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,768,189 bp
GenBank #: CP148583
REBASE acronym: EcoC0001
Org_num: 76437
All begin WHU38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17850 | helix-turn-helix transcriptional regulator | |||
| 17855 | M | M1.Eco009ORF17860P (100% identity) | M1.EcoC0001ORF17855P | |
| 17860 | M | M2.EcoC0010ORF8995P (100% identity) | M2.EcoC0001ORF17855P | |
| 17865 | S | S.Eco009ORF17860P (100% identity) | S.EcoC0001ORF17855P | |
| 17870 | R | EcoC0010ORF8995P (100% identity) | EcoC0001ORF17855P | |
| 17875 | IS110 family transposase | |||
| 17990 | 677 aa hypothetical protein | |||
| 17995 | R | Ecos4422ORF22930P (100% identity) | CYAYNNNNNNNTTAC | EcoC0001ORF18005P |
| 18000 | S | S.EcoDEC15BORF5167P (100% identity) | CYAYNNNNNNNTTAC | S.EcoC0001ORF18005P |
| 18005 | M | M.Ecos4422ORF22930P (100% identity) | CYAYNNNNNNNTTAC | M.EcoC0001ORF18005P |
| 18010 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5555 | drug/metabolite exporter YedA | |||
| 5560 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoC0001DcmP |
| 5565 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC0001DcmP |
| 5570 | phosphohydrolase | |||
| 12610 | DNA-binding transcriptional regulator Fis | |||
| 12615 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoC0001ORF12615P |
| 12620 | DUF2556 family protein | |||
| 13165 | ribulose-phosphate 3-epimerase | |||
| 13170 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC0001DamP |
| 13175 | cell division protein DamX | |||
| 18455 | PerC family transcriptional regulator | |||
| 18460 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoC0001ORF18460P |
| 18465 | LexA family transcriptional regulator | |||
| 22730 | recombination protein NinB | |||
| 22735 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoC0001ORF22735P |
| 22740 | NinE family protein | |||