Escherichia coli JX21CE35 |
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Putative Escherichia coli JX21CE35 RM systems
Ref: He,D. and Feng,Y. unpublished
REBASE ref # 38512
| Sequence length: | GenBank #: | |
| Chromosome: | 4,667,758 bp | CP139182 |
| plasmid pCE35-1: | 86,341 bp | CP139183 |
| plasmid pCE35-2: | 57,902 bp | CP139184 |
REBASE acronym: EcoE35
Org_num: 76435
All begin SKB21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3505 | 63 aa hypothetical protein | |||
| 3510 | R | EcoEC31ORF3550P (100% identity) | EcoE35ORF3525P | |
| 3515 | S | S.Sen1467ORF14775P (63% identity) | S.EcoE35ORF3525AP | |
| 3520 | S | S.EcoTHO010ORF28970P (29% identity) | S.EcoE35ORF3525BP | |
| 3525 | M | M.EcoTHO010ORF28970P (100% identity) | M.EcoE35ORF3525P | |
| 3530 | GTPase family protein | |||
| 9250 | 410 aa hypothetical protein | |||
| 9255 | M | M.Eho50EhORF13780P (100% identity) | M.EcoE35ORF9255P | |
| 9260 | S | S.EcoPD7ORF8965P (100% identity) | S.EcoE35ORF9255P | |
| 9265 | R | EcoPD7ORF8965P (100% identity) | EcoE35ORF9255P | |
| 9270 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1670 | cell division protein DamX | |||
| 1675 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE35DamP |
| 1680 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE35ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 8930 | phosphohydrolase | |||
| 8935 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoE35DcmP |
| 8940 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoE35DcmP |
| 8945 | drug/metabolite exporter YedA | |||
| 16265 | NinE family protein | |||
| 16270 | M | M.Efe1521ORF4420P (100% identity) | GATC | M.EcoE35ORF16270P |
| 16275 | recombination protein NinB | |||
| plasmid pCE35-1 | ||||
| 23035 | 97 aa hypothetical protein | |||
| 23040 | M | M.Xca80ORFEP (100% identity) | M.EcoE35ORF23040P | |
| 23045 | 73 aa hypothetical protein | |||
| plasmid pCE35-2 | ||||
| 23395 | recombinase family protein | |||
| 23400 | R | Ssp3CORF24390P (100% identity) | CCWGG | EcoE35ORF23405P |
| 23405 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.EcoE35ORF23405P |
| 23410 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19950 | S8 family peptidase | |||
| 19955 | M | M.EcoPC2ORF20200P (100% identity) | M.EcoE35ORF19955P | |
| 19960 | R | EcoPC2ORF20200P (100% identity) | EcoE35ORF19955P | |
| 19965 | 168 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19775 | IS1-like element IS1A family transposase | |||
| 19780 | R | EcoL621GmrSDP (100% identity) | EcoE35GmrSDP | |
| 19785 | cytoplasmic protein | |||