Desulfovibrio vulgaris Hildenborough |
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Putative Desulfovibrio vulgaris Hildenborough RM systems
Ref: Heidelberg,J.F. et al. Nat. Biotechnol. 22 (5), 554-559 (2004)
REBASE ref # 8555
| Sequence length: | GenBank #: | |
| chromosome: | 3,570,858 bp | AE017285 (NC_002937) |
| megaplasmid: | 202,301 bp | AE017286 (NC_005863) |
REBASE acronym: Dvu
Org_num: 3893
All begin DVU_, DVUA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome | ||||
| 1702 | 247 aa conserved hypothetical protein | |||
| 1703 | R | DvuRCH1ORF1586P (100% identity) | TGACNNNNNNTTC | DvuI |
| 1704 | 75 aa conserved hypothetical protein | |||
| ??? | S | S.DvuRCH1ORF1586P (100% identity) | TGACNNNNNNTTC | S.DvuI |
| 1707 | 69 aa hypothetical protein | |||
| 1708 | 337 aa conserved hypothetical protein | |||
| 1709 | M | M.DvuRCH1ORF1586P (100% identity) | TGACNNNNNNTTC | M.DvuI |
| 1710 | 192 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome | ||||
| 191 | 519 aa conserved hypothetical protein | |||
| 192 | M | M.DvuRCH1ORF2659P (97% identity) | M.DvuORF192P | |
| 193 | 243 aa hypothetical protein | |||
| 1097 | 249 aa conserved hypothetical protein | |||
| 1098 | M | M.DvuRCH1ORF1015P (100% identity) | M.DvuORF1098P | |
| 1099 | tail fiber assembly protein, putative | |||
| 1514 | 405 aa hypothetical protein | |||
| 1515 | M | M.DvuRCH1ORF1779P (99% identity) | M.DvuORF1515P | |
| 1516 | 119 aa hypothetical protein | |||
| 1745 | DNA-binding protein | |||
| 1746 | M | M.DvuRCH1ORF1552P (100% identity) | M.DvuORF1746P | |
| 1747 | ATPase, histidine kinase-, DNA gyrase B-, and | |||
| 2021 | 155 aa hypothetical protein | |||
| 2022 | RM | DvuRCH1ORF1296P (100% identity) | DvuORF2022P | |
| 2023 | 179 aa hypothetical protein | |||
| 2174 | 225 aa hypothetical protein | |||
| 2175 | RM | DvuRCH1ORF2026P (100% identity) | CACNCAC | DvuIII |
| 2176 | 59 aa hypothetical protein | |||
| 2732 | 66 aa conserved hypothetical protein | |||
| 2733 | M | M.DvuRCH1ORF2524P (100% identity) | M.DvuORF2733P | |
| 2734 | 127 aa hypothetical protein | |||
| 2840 | 233 aa conserved hypothetical protein | |||
| 2841 | R | DvuRCH1ORF2624P (100% identity) | CCWGG | DvuORF2842P |
| 2842 | M | M.DvuRCH1ORF2624P (100% identity) | CCWGG | M.DvuORF2842P |
| 2843 | V | V.CliKPSORF251P (63% identity) | V.DvuORF2842P | |
| 2844 | 287 aa hypothetical protein | |||
| 2877 | 240 aa hypothetical protein | |||
| 2878 | M | M.DvuRCH1ORF2659P (100% identity) | M.DvuORF2878P | |
| 2879 | 518 aa conserved hypothetical protein | |||
| megaplasmid | ||||
| 18 | 62 aa hypothetical protein | |||
| 19 | M | M.DvuRCH1ORF3112P (98% identity) | CTCGAG | M.DvuII |
| 20 | R | DvuRCH1ORF3112P (100% identity) | CTCGAG | DvuIIP |
| 21 | 353 aa conserved hypothetical protein | |||