Haemophilus influenzae F3047 |
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Putative Haemophilus influenzae F3047 RM systems
Ref: Strouts,F.R. et al. unpublished
REBASE ref # 12429
Complete sequence: 2,007,018 bp
GenBank #: FQ670204 (NC_014922)
REBASE acronym: Hin3047
Org_num: 6645
All begin HICON_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3780 | 251 aa conserved hypothetical NIF3-like protein | |||
| 3790 | M | M.Hin3043ORF670P (100% identity) | M.Hin3047ORF3790P | |
| 3800 | predicted transcriptional regulator | |||
| 3810 | S | S.Hin3043ORF670P (100% identity) | S.Hin3047ORF3790P | |
| 3820 | R | Hin14951ORFDP (100% identity) | Hin3047ORF3790P | |
| 3830 | 400 aa Conserved hypothetical protein | |||
| 12550 | conserved inner membrane protein | |||
| 12560 | R | Hin3052ORF3135P (100% identity) | Hin3047ORF12600P | |
| 12570 | 313 aa conserved hypothetical protein | |||
| 12580 | S | S.Hin14951ORFEP (100% identity) | S.Hin3047ORF12600P | |
| 12590 | DNA binding protein | |||
| 12600 | M | M.Hin3043ORF5600P (100% identity) | M.Hin3047ORF12600P | |
| 12610 | oligopeptidase A | |||
| 18100 | Transposase | |||
| 18090 | R | Hin14951ORFLP (100% identity) | Hin3047ORF18060P | |
| 18080 | uncharacterised protein | |||
| 18070 | S | S.Hin3052ORF195P (100% identity) | S.Hin3047ORF18060P | |
| 18060 | M | M.Hin14951ORFLP (100% identity) | M.Hin3047ORF18060P | |
| 18050 | 30s ribosome binding factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7130 | 166 aa conserved hypothetical protein | |||
| 7140 | M | M.Hin3043ORF2480P (100% identity) | M.Hin3047ORF7140P | |
| 7150 | Phage tail sheath-like protein | |||
| 10380 | 138 aa conserved hypothetical protein | |||
| 10390 | M | M.HinGGORF5020P (100% identity) | M.Hin3047ORF10390P | |
| 10400 | 119 aa conserved hypothetical protein | |||
| 10480 | 115 aa conserved hypothetical protein | |||
| 10490 | M | M.Hin3043ORF4415P (100% identity) | M.Hin3047ORF10490P | |
| 10500 | 343 aa conserved hypothetical protein | |||
| 12280 | queuine tRNA-ribosyltransferase | |||
| 12290 | RM | Hin3052ORF3320P (100% identity) | GAYNNNNNRTC | Hin3047ORF12290P |
| 12300 | S | S.HinIII8ORF7560P (100% identity) | GAYNNNNNRTC | S.Hin3047ORF12290P |
| 12310 | 172 aa conserved hypothetical protein | |||
| 12650 | Phosphatidylglycerophosphatase B | |||
| 12660 | M | M.Hin3052ORF3105P (100% identity) | GATC | M.Hin3047DamP |
| 12670 | 3-dehydroquinate synthase | |||
| 15370 | uncharacterised protein | |||
| 15380 | M | M.Hin3052ORF1590P (100% identity) | M.Hin3047ORF15380P | |
| 15400 | Single-strand binding protein | |||
| 17280 | predicted semialdehyde dehydrogenase | |||
| ??? | RM | Hin3043ORF7745P (64% identity) | Hin3047ORF17270P | |
| 17250 | tryptophan synthase, alpha subunit | |||
| 16920 | 291 aa conserved hypothetical protein | |||
| 16910 | R | Hin3052ORF800P (100% identity) | GGCC | Hin3047ORF16900P |
| 16900 | M | M.Hin14951ORFKP (100% identity) | GGCC | M.Hin3047ORF16900P |
| 16890 | Cell division protein MukB | |||
| 16880 | Condesin subunit E | |||
| 16870 | R | HinV1ORF15060P (100% identity) | RGCGCY | Hin3047ORF16860P |
| 16860 | M | M.HinV1ORF15060P (100% identity) | RGCGCY | M.Hin3047ORF16860P |
| 16850 | Condesin subunit F | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2270 | ribonuclease HII, degrades RNA of DNA-RNA | |||
| 2280 | M | M.Hin14951ORFIP (100% identity) | GCAGA | M.Hin3047ORF2280P |
| 2290 | R | Hin14951ORFIP (100% identity) | GCAGA | Hin3047ORF2280P |
| 2300 | uncharacterised protein | |||