Haemophilus influenzae F3031 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Haemophilus influenzae F3031 RM systems
Ref: Strouts,F.R. et al. unpublished
REBASE ref # 12429
Complete sequence: 1,985,832 bp
GenBank #: FQ670178 (NC_014920)
REBASE acronym: Hin3031
Org_num: 6644
All begin HIBPF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1450 | 251 aa conserved hypothetical NIF3-like protein | |||
| 1460 | M | M.Hin3037ORF5900P (100% identity) | M.Hin3031ORF1460P | |
| 1470 | predicted transcriptional regulator containing | |||
| 1480 | S | S.HinP3EMOORF6585P (100% identity) | S.Hin3031ORF1460P | |
| 1490 | R | Hin3037ORF5900P (100% identity) | Hin3031ORF1460P | |
| 1500 | Signal recognition particle protein | |||
| 6810 | Translation initiation factor IF-2 | |||
| 6820 | R | Hin3037ORF3090P (100% identity) | Hin3031ORF6860P | |
| 6830 | S | S.Hin3037ORF3090P (100% identity) | S.Hin3031ORF6860P | |
| 6860 | M | M.Hin3028ORF1845P (100% identity) | M.Hin3031ORF6860P | |
| 6870 | 30s ribosome binding factor | |||
| 20460 | oligopeptidase A | |||
| 20470 | M | M.Hin3037ORF6485P (100% identity) | M.Hin3031ORF20470P | |
| 20480 | DNA binding protein | |||
| 20490 | S | S.Hin3052ORF3135P (100% identity) | S.Hin3031ORF20470P | |
| 20510 | 306 aa conserved hypothetical protein | |||
| 20530 | R | Hin3037ORF6485P (100% identity) | Hin3031ORF20470P | |
| 20550 | conserved inner membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1110 | protein of unknown function | |||
| 1120 | M | M.Hin3037ORF4565P (100% identity) | GATC | M.Hin3031ORF1120P |
| 1160 | uncharacterised protein | |||
| 1860 | Restriction modification enzyme | |||
| 1870 | RM | Hin3037ORF5695P (100% identity) | GAYNNNNNRTC | Hin3031ORF1870P |
| 1880 | queuine tRNA-ribosyltransferase | |||
| 4190 | 343 aa conserved hypothetical protein | |||
| 4200 | M | M.Hin1946ORF3890P (100% identity) | M.Hin3031ORF4200P | |
| 4220 | 115 aa conserved hypothetical protein | |||
| 4300 | 119 aa conserved hypothetical protein | |||
| 4320 | M | M.HinGGORF5020P (100% identity) | M.Hin3031ORF4320P | |
| 4350 | 138 aa conserved hypothetical protein | |||
| 4792 | 111 aa conserved hypothetical protein | |||
| 4801 | M | M.Hin3037ORF4155P (100% identity) | BA | M.Hin3031ORF4801P |
| 4802 | 166 aa conserved hypothetical protein | |||
| 7340 | cell division protein MukB | |||
| 7341 | M | M.Hin8603ORF6705P (100% identity) | GGCC | M.Hin3031ORF7341P |
| 7350 | R | Hin3052ORF800P (100% identity) | GGCC | Hin3031ORF7341P |
| 7370 | 291 aa conserved hypothetical protein | |||
| 7750 | tryptophan synthase, alpha subunit | |||
| 7760 | RM | Hin3037ORF2660P (100% identity) | Hin3031ORF7750P | |
| 7770 | S | S.Hin3037ORF2660P (100% identity) | S.Hin3031ORF7750P | |
| 7790 | predicted semialdehyde dehydrogenase | |||
| 16610 | Heat shock protein HtpX | |||
| 16620 | M | M.Hin3037ORF8290P (86% identity) | GAATTC | M.Hin3031ORF16620P |
| 16630 | HNH endonuclease | |||
| 17990 | predicted peptidase | |||
| 18000 | M | M1.Hin3037ORF7675P (100% identity) | GATGG | M1.Hin3031ORF18000P |
| 18010 | M | M2.Hin3037ORF7675P (99% identity) | CCATC | M2.Hin3031ORF18000P |
| 18040 | R | Hin3037ORF7675P (100% identity) | CCATC | Hin3031ORF18000P |
| 18050 | thymidine kinase/deoxyuridine kinase | |||
| 20390 | 3-dehydroquinate synthase | |||
| 20400 | M | M.Hin3037ORF6515P (100% identity) | GATC | M.Hin3031DamP |
| 20420 | Phosphatidylglycerophosphatase B | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12070 | ribonuclease HII, degrades RNA of DNA-RNA | |||
| 12080 | M | M.Hin3037ORF405P (97% identity) | M.Hin3031ORF12080P | |
| 12081 | R | Hin3037ORF405P (100% identity) | Hin3031ORF12080P | |
| 12100 | uncharacterised protein | |||
| 16830 | 140 aa conserved hypothetical protein | |||
| 16840 | R | Hin3037ORF8190P (100% identity) | Hin3031ORF16860P | |
| 16860 | M | M.Hae8135ORF1831P (96% identity) | M.Hin3031ORF16860P | |
| 16880 | FKBP-type peptidyl prolyl cis-trans isomerase | |||