Escherichia coli MS 196-1 |
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Putative Escherichia coli MS 196-1 RM systems
Ref: Tsai,M.T. unpublished
REBASE ref # 38435
| Sequence length: | GenBank #: | |
| Chromosome: | 5,125,511 bp | CP146681 |
| plasmid unnamed1: | 120,515 bp | CP146682 |
| plasmid unnamed3: | 102,738 bp | CP146684 |
REBASE acronym: Eco1961
Org_num: 76173
All begin V9Z39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21645 | adenine/cytosine-specific restriction | |||
| 21650 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco1961ORF21655P |
| 21655 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco1961ORF21655P |
| 21660 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco1961ORF21655P |
| 21665 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1785 | cell division protein DamX | |||
| 1790 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1961DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2410 | DUF2556 family protein | |||
| 2415 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1961ORF2415P |
| 2420 | DNA-binding transcriptional regulator Fis | |||
| 6685 | serine/threonine protein phosphatase | |||
| 6690 | M | M.Eco828ORF7140P (99% identity) | M.Eco1961ORF6690P | |
| 6695 | PerC family transcriptional regulator | |||
| 9195 | phosphohydrolase | |||
| 9200 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco1961DcmP |
| 9205 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco1961DcmP |
| 9210 | drug/metabolite exporter YedA | |||
| 19990 | zinc ribbon domain-containing protein | |||
| 19995 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco1961ORF19995P |
| 20000 | integrase arm-type DNA-binding domain-containing | |||
| plasmid unnamed1 | ||||
| 25235 | 73 aa hypothetical protein | |||
| 25240 | M | M.Sso866ORF27155P (100% identity) | M.Eco1961ORF25240P | |
| 25245 | 103 aa hypothetical protein | |||
| plasmid unnamed3 | ||||
| 26660 | 168 aa hypothetical protein | |||
| 26665 | M | M.Sfl2142ORF380P (74% identity) | M.Eco1961ORF26665P | |
| 26670 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21665 | endoribonuclease SymE | |||
| 21670 | R | Ssp28760McrBP (99% identity) | Eco1961McrBP | |
| 21675 | R | Ssp28760McrCP (99% identity) | Eco1961McrCP | |