Escherichia coli L26 |
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Putative Escherichia coli L26 RM systems
Ref: Zhang,L. et al. unpublished
REBASE ref # 38402
| Sequence length: | GenBank #: | |
| Chromosome: | 5,150,684 bp | CP146250 |
| plasmid pL26-2: | 98,998 bp | CP146252 |
REBASE acronym: EcoL26
Org_num: 76043
All begin V6M96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21185 | restriction endonuclease | |||
| 21190 | M | M.EcoC6335ORF21555P (100% identity) | GTCANNNNNCTC | M.EcoL26ORF21190P |
| 21195 | S | S.EcoC6335ORF21555P (99% identity) | GTCANNNNNCTC | S.EcoL26ORF21190P |
| 21200 | R | Eco11I9ORF23470P (100% identity) | GTCANNNNNCTC | EcoL26ORF21190P |
| 21205 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1920 | cell division protein DamX | |||
| 1925 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoL26DamP |
| 1930 | ribulose-phosphate 3-epimerase | |||
| 2450 | DUF2556 family protein | |||
| 2455 | M | M.Eco11I9ORF17455P (100% identity) | ATGCAT | M.EcoL26ORF2455P |
| 2460 | DNA-binding transcriptional regulator Fis | |||
| 9950 | phosphohydrolase | |||
| 9955 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoL26DcmP |
| 9960 | V | V.EcosA30DcmP (100% identity) | V.EcoL26DcmP | |
| 9965 | drug/metabolite exporter YedA | |||
| 21410 | RM | Eco13C08ORF19555P (100% identity) | GAAABCC | EcoL26ORF21410P |
| 21415 | DEAD/DEAH box helicase | |||
| plasmid pL26-2 | ||||
| 25580 | 73 aa hypothetical protein | |||
| 25585 | M | M.StyR64ORFAP (100% identity) | M.EcoL26ORF25585P | |
| 25590 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21180 | BrnT family toxin | |||
| 21185 | R | EcosEC9MrrP (100% identity) | EcoL26MrrP | |
| 21190 | class I SAM-dependent DNA methyltransferase | |||