Roseovarius species S88 |
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Putative Roseovarius species S88 RM systems
Ref: Lee,M.W. et al. unpublished
REBASE ref # 38471
| Sequence length: | GenBank #: | |
| Chromosome: | 3,536,096 bp | CP146069 |
| plasmid unnamed: | 101,003 bp | CP146070 |
REBASE acronym: RspS88
Org_num: 76301
All begin RZ517_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14880 | AlpA family phage regulatory protein | |||
| 14885 | M | M.Csu2576ORFDP (14% identity) | M.RspS88ORF14885BP | |
| 14890 | M | M.VeiORF3546P (61% identity) | M.RspS88ORF14885AP | |
| 14895 | AAA family ATPase | |||
| 14900 | S | S.CmeYL2ORF12115P (39% identity) | S.RspS88ORF14885P | |
| 14905 | R | AfaZD02ORF14150P (79% identity) | RspS88ORF14885P | |
| 14910 | recombinase family protein | |||
| plasmid unnamed | ||||
| 18200 | IS1182 family transposase | |||
| 18205 | R | PinM647ORF10970P (98% identity) | RspS88ORF18215P | |
| 18210 | S | S.NpeUS61ORF2528P (56% identity) | S.RspS88ORF18215P | |
| 18215 | M | M.PinM647ORF10970P (97% identity) | M.RspS88ORF18215P | |
| 18220 | N-6 DNA methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2450 | ribonuclease HII | |||
| 2455 | M | M.RspW115ORF6240P (99% identity) | M.RspS88ORF2455P | |
| 2460 | TetR/AcrR family transcriptional regulator | |||
| 5825 | 140 aa hypothetical protein | |||
| 5830 | R | Rsp16aORF31365P (54% identity) | RspS88ORF5830P | |
| 5835 | 282 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6745 | ATP-binding protein | |||
| 6750 | R | PinP72MrrP (69% identity) | RspS88MrrP | |
| 6755 | DUF6638 family protein | |||