Escherichia coli PA11 |
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Putative Escherichia coli PA11 RM systems
Ref: Gonzalez-Escalona,N. et al. unpublished
REBASE ref # 38404
Complete sequence: 5,382,593 bp
GenBank #: CP145942
REBASE acronym: EcoPA11
Org_num: 76045
All begin V6774_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20230 | endoribonuclease SymE | |||
| 20235 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcoPA11ORF20240P |
| 20240 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcoPA11ORF20240P |
| 20245 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | EcoPA11ORF20240P |
| 20250 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3545 | 35 aa hypothetical protein | |||
| 3550 | M | M.Ecos15739ORF2910P (100% identity) | M.EcoPA11ORF3550P | |
| 3555 | O-methyltransferase | |||
| 3560 | R | Ecos15739ORF2910P (100% identity) | EcoPA11ORF3550P | |
| 3565 | DUF1367 family protein | |||
| 7030 | drug/metabolite exporter YedA | |||
| 7035 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.EcoPA11DcmP |
| 7040 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoPA11DcmP |
| 7045 | phosphohydrolase | |||
| 14325 | DNA-binding transcriptional regulator Fis | |||
| 14330 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcoPA11ORF14330P |
| 14335 | DUF2556 family protein | |||
| 14840 | ribulose-phosphate 3-epimerase | |||
| 14845 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoPA11DamP |
| 14850 | cell division protein DamX | |||
| 19965 | transposase | |||
| 19970 | R | Ecos1613ORF26795P (100% identity) | EcoPA11ORF19970P | |
| 19975 | N-acetylneuraminic acid mutarotase | |||
| 20005 | DEAD/DEAH box helicase | |||
| 20010 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcoPA11ORF20010P |
| 26600 | recombination protein NinB | |||
| 26605 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoPA11ORF26605P |
| 26610 | NinE family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20215 | DUF1127 domain-containing protein | |||
| ??? | R | EcosPA8GmrSDP (100% identity) | EcoPA11GmrSDP | |
| 20230 | endoribonuclease SymE | |||