Escherichia coli CAVp367 |
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Putative Escherichia coli CAVp367 RM systems
Ref: Sheppard,A.E. et al. unpublished
REBASE ref # 38211
| Sequence length: | GenBank #: | |
| Chromosome: | 4,978,172 bp | CP145139 |
| plasmid pCAVP367-126: | 126,126 bp | CP145140 |
| plasmid pCAVP367-48: | 47,626 bp | CP145143 |
| plasmid pCAVP367-77: | 76,846 bp | CP145141 |
REBASE acronym: Ecop367
Org_num: 75246
All begin LMH29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16790 | endoribonuclease SymE | |||
| 16795 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Ecop367ORF16805P |
| 16800 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Ecop367ORF16805P |
| 16805 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Ecop367ORF16805P |
| 16810 | restriction endonuclease | |||
| 18605 | 156 aa hypothetical protein | |||
| 18610 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Ecop367ORF18615P |
| 18615 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Ecop367ORF18615P |
| 18620 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Ecop367ORF18615P |
| 18625 | type IV toxin-antitoxin system AbiEi family | |||
| plasmid pCAVP367-126 | ||||
| 24820 | type II toxin-antitoxin system Phd/YefM family | |||
| 24825 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.Ecop367ORF24825P |
| 24830 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.Ecop367ORF24825P |
| 24835 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | Ecop367ORF24825P |
| 24840 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3520 | drug/metabolite exporter YedA | |||
| 3525 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Ecop367DcmP |
| 3530 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Ecop367DcmP |
| 3535 | phosphohydrolase | |||
| 12630 | ribulose-phosphate 3-epimerase | |||
| 12635 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecop367DamP |
| 12640 | cell division protein DamX | |||
| 14675 | DUF2556 family protein | |||
| 14680 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Ecop367ORF14680P |
| 14685 | DNA-binding transcriptional regulator Fis | |||
| 22140 | 71 aa hypothetical protein | |||
| 22145 | M | M.KpnYN1ORFGP (89% identity) | M.Ecop367ORF22145P | |
| 22150 | helix-turn-helix transcriptional regulator | |||
| 24405 | TrmB family transcriptional regulator | |||
| 24410 | M | M.EcosS9ORF10680P (100% identity) | A | M.Ecop367ORF24410P |
| 24425 | DUF3927 family protein | |||
| plasmid pCAVP367-126 | ||||
| 24890 | 103 aa hypothetical protein | |||
| 24895 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Ecop367ORF24895P |
| 24900 | 73 aa hypothetical protein | |||
| plasmid pCAVP367-48 | ||||
| 26205 | 75 aa hypothetical protein | |||
| 26210 | M | M.EcoE1ORF26125P (100% identity) | M.Ecop367ORF26210P | |
| 26215 | 90 aa hypothetical protein | |||
| plasmid pCAVP367-77 | ||||
| 25570 | 73 aa hypothetical protein | |||
| 25575 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Ecop367ORF25575P |
| 25580 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3730 | SpnT protein | |||
| 3735 | M | M.EcosS2ORF3675P (100% identity) | M.Ecop367ORF3735P | |
| 3740 | R | Ecost88ORF24685P (100% identity) | Ecop367ORF3735P | |
| 3745 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16805 | class I SAM-dependent DNA methyltransferase | |||
| 16810 | R | Ecou021MrrP (100% identity) | Ecop367MrrP | |
| 16815 | BrnT family toxin | |||