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Putative Azotobacter vinelandii DJ RM systems
Ref: Russell,S.J. et al. mSystems (2024) In press
REBASE ref #
Sequence length: | GenBank #: | |
Chromosome: | 5,373,656 bp | CP144736 |
Chromosome: | 5,374,382 bp | CP144734 |
Chromosome: | 5,374,411 bp | CP144733 |
REBASE acronym:
Org_num:
All begin SF175_, V4939_, V4941_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3435 | cation-transporting P-type ATPase | |||
??? | RM | AviJORF9790P (100% identity) | AvisD3aORF3440P | |
3450 | AAA family ATPase | |||
21920 | 447 aa hypothetical protein | |||
21925 | V | V.AviJORF15925P (100% identity) | V.AvisD3aORF21930P | |
21930 | M | M.AviJORF15925P (100% identity) | M.AvisD3aORF21930P | |
21935 | DNA repair protein RadC | |||
Chromosome | ||||
12285 | 447 aa hypothetical protein | |||
12290 | V | V.AvisD3aORF21930P (100% identity) | V.AviDJbORF12295P | |
12295 | M | M.AvisD3aORF21930P (100% identity) | M.AviDJbORF12295P | |
12300 | DNA repair protein RadC | |||
18415 | cation-transporting P-type ATPase | |||
??? | RM | AvisD3aORF3440P (100% identity) | AviDJbORF18420P | |
18430 | AAA family ATPase | |||
Chromosome | ||||
9780 | AAA family ATPase | |||
??? | RM | AvisD3aORF3440P (100% identity) | AviJORF9790P | |
9795 | cation-transporting P-type ATPase | |||
15920 | DNA repair protein RadC | |||
15925 | M | M.AvisD3aORF21930P (100% identity) | M.AviJORF15925P | |
15930 | V | V.AvisD3aORF21930P (100% identity) | V.AviJORF15925P | |
15935 | 447 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2700 | mobilization protein | |||
??? | R | AviCAORF24470P (100% identity) | AvisD3aORF2715P | |
2715 | M | M.AviJORF10515P (100% identity) | M.AvisD3aORF2715P | |
2720 | transcriptional regulator | |||
Chromosome | ||||
4545 | ATP-binding protein | |||
4550 | M | M.AvisD3aORF14180P (100% identity) | M.AviDJbORF4550P | |
4555 | virulence RhuM family protein | |||
4560 | R | AvisD3aORF14180P (100% identity) | AviDJbORF4550P | |
4565 | phage integrase N-terminal domain-containing | |||
17680 | mobilization protein | |||
??? | R | AvisD3aORF2715P (99% identity) | AviDJbORF17695P | |
17695 | M | M.AvisD3aORF2715P (100% identity) | M.AviDJbORF17695P | |
17700 | transcriptional regulator | |||
Chromosome | ||||
10510 | transcriptional regulator | |||
10515 | M | M.AvisD3aORF2715P (100% identity) | M.AviJORF10515P | |
10520 | R | AviAORF6788P (100% identity) | AviJORF10515P | |
10525 | 135 aa hypothetical protein | |||
23675 | phage integrase N-terminal domain-containing | |||
23680 | R | AvisD3aORF14180P (100% identity) | AviJORF23690P | |
23685 | virulence RhuM family protein | |||
23690 | M | M.AvisD3aORF14180P (100% identity) | M.AviJORF23690P | |
23695 | ATP-binding protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12205 | metallophosphoesterase | |||
12210 | R | AviJMrrP (100% identity) | AvisD3aMrrP | |
12215 | WYL domain-containing protein | |||
14150 | helix-turn-helix domain-containing protein | |||
14155 | R | AviJMrr2P (100% identity) | AvisD3aMrr2P | |
14160 | SNF2-related protein | |||
Chromosome | ||||
4520 | helix-turn-helix domain-containing protein | |||
4525 | R | AvisD3aMrr2P (100% identity) | AviDJbMrr2P | |
4530 | SNF2-related protein | |||
Chromosome | ||||
23710 | SNF2-related protein | |||
23715 | R | AvisD3aMrr2P (100% identity) | AviJMrr2P | |
23720 | helix-turn-helix domain-containing protein |