Haemophilus influenzae P3_EMO |
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Putative Haemophilus influenzae P3_EMO RM systems
Ref: Gaibani,P. and Secci,B. unpublished
REBASE ref # 38266
Complete sequence: 1,938,061 bp
GenBank #: CP144280
REBASE acronym: HinP3EMO
Org_num: 75422
All begin V3I11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3645 | translation initiation factor IF-2 | |||
| 3650 | R | HinII7ORF12630P (100% identity) | HinP3EMOORF3665P | |
| 3655 | abortive infection family protein | |||
| 3660 | S | S.HinII7ORF12630P (100% identity) | S.HinP3EMOORF3665P | |
| 3665 | M | M.HinII7ORF12630P (97% identity) | M.HinP3EMOORF3665P | |
| 3670 | 30S ribosome-binding factor RbfA | |||
| 6580 | Nif3-like dinuclear metal center hexameric | |||
| 6585 | M | M.HinII7ORF9480P (100% identity) | ATGNNNNNNCCT | M.HinP3EMOORF6585P |
| 6590 | ATP-binding protein | |||
| 6595 | S | S.HinNTHORFYP (99% identity) | ATGNNNNNNCCT | S.HinP3EMOORF6585P |
| 6600 | R | HinII7ORF9480P (100% identity) | ATGNNNNNNCCT | HinP3EMOORF6585P |
| 6605 | signal recognition particle protein | |||
| 7180 | oligopeptidase A | |||
| 7185 | M | M.HinIII5ORF8040P (100% identity) | GCANNNNNNNTTC | M.HinP3EMOORF7185P |
| 7190 | S | S.HinIII5ORF8040P (100% identity) | GCANNNNNNNTTC | S.HinP3EMOORF7185P |
| 7195 | AAA family ATPase | |||
| 7200 | virulence RhuM family protein | |||
| 7205 | R | HinIII5ORF8040P (100% identity) | GCANNNNNNNTTC | HinP3EMOORF7185P |
| 7210 | YkgB family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3880 | chromosome partition protein MukF | |||
| 3885 | M | M.HinII7ORF13060P (100% identity) | RGCGCY | M.HinP3EMOORF3885P |
| 3890 | R | HinKR271ORF1213P (100% identity) | RGCGCY | HinP3EMOORF3885P |
| 3895 | chromosome partition protein MukE | |||
| 4180 | S24 family peptidase | |||
| 4185 | R | Kpn33621ORFGP (45% identity) | GTCGAC | R1.HinP3EMOORF4195P |
| 4190 | R | HinII7ORF13680P (100% identity) | GTCGAC | R2.HinP3EMOORF4195P |
| 4195 | M | M.HinII7ORF13680P (100% identity) | GTCGAC | M.HinP3EMOORF4195P |
| 4200 | KilA-N domain-containing protein | |||
| 5235 | 119 aa hypothetical protein | |||
| 5240 | M | M.Hin723ORF1819P (100% identity) | M.HinP3EMOORF5240P | |
| 5245 | 182 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1805 | carboxymuconolactone decarboxylase family | |||
| 1810 | R | HinII2ORF18870P (100% identity) | HinP3EMOORF1815P | |
| 1815 | M | M.HinII2ORF18870P (67% identity) | M.HinP3EMOORF1815BP | |
| 1825 | M | M.HinIII4ORF16580AP (100% identity) | M.HinP3EMOORF1815AP | |
| 1830 | ribonuclease HII | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7150 | 3-dehydroquinate synthase | |||
| 7155 | M | M.HinNTHDamP (100% identity) | GATC | M.HinP3EMOORF7155P |
| 7160 | phosphatase PAP2 family protein | |||