Halopseudomonas pachastrellae ST67RT_ISS_1225 |
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Putative Halopseudomonas pachastrellae ST67RT_ISS_1225 RM systems
Ref: Alam,I. et al. unpublished
REBASE ref # 38269
Complete sequence: 4,385,353 bp
GenBank #: CP143555
REBASE acronym: Hpa25
Org_num: 75428
All begin ULG90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3400 | integrase core domain-containing protein | |||
| 3405 | R | Poc100277ORF17970P (98% identity) | Hpa25ORF3435P | |
| 3410 | McrC family protein | |||
| 3415 | AAA family ATPase | |||
| 3420 | S | S.Ppa46540ORF17825P (16% identity) | S2.Hpa25ORF3435P | |
| 3425 | S | S.Ppa46540ORF17825P (55% identity) | S1.Hpa25ORF3435P | |
| 3430 | IS3 family transposase | |||
| 3435 | M | M.Ppa46540ORF17825P (98% identity) | M.Hpa25ORF3435P | |
| 3440 | 232 aa hypothetical protein | |||
| 17350 | N-6 DNA methylase | |||
| ??? | M | M.Hpa1ORF9180P (94% identity) | M.Hpa25ORF17355P | |
| 17370 | 64 aa hypothetical protein | |||
| 17375 | restriction endonuclease subunit S | |||
| 17380 | AAA family ATPase | |||
| ??? | R | Ppa46540ORF15040P (96% identity) | Hpa25ORF17355P | |
| 17405 | SprT family zinc-dependent metalloprotease | |||
| 20875 | crotonase/enoyl-CoA hydratase family protein | |||
| 20880 | R | Psa8338ORF2972P (9% identity) | Hpa25ORFAAP | |
| 20885 | R | Psa8338ORF2972P (20% identity) | Hpa25ORFABP | |
| 20890 | R | Psa8338ORF2972P (10% identity) | Hpa25ORFACP | |
| 20895 | R | Psa8338ORF2972P (8% identity) | Hpa25ORFADP | |
| 20900 | R | Psa8338ORF2972P (4% identity) | Hpa25ORFAEP | |
| 20905 | R | Hpa1ORF12810EP (75% identity) | Hpa25ORFAFP | |
| 20910 | 84 aa hypothetical protein | |||
| 20915 | S | S.PprC007ORFZP (20% identity) | S.Hpa25ORFAAP | |
| 20920 | IS30-like element ISPsp7 family transposase | |||
| 20925 | S | S.Hpa1ORF12810P (83% identity) | S.Hpa25ORFABP | |
| ??? | M | M.Psa8338ORF2972P (19% identity) | M.Hpa25ORFAAP | |
| ??? | M | M.Mth10ORFNP (11% identity) | M.Hpa25ORFABP | |
| 20935 | IS21 family transposase | |||
| 20940 | IS21-like element helper ATPase IstB | |||
| 20945 | M | M.Psa8338ORF2972P (18% identity) | M.Hpa25ORFACP | |
| 20950 | M | M.Mth10ORFNP (13% identity) | M.Hpa25ORFADP | |
| 20955 | competence protein CoiA family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2315 | 582 aa hypothetical protein | |||
| ??? | RM | Pae30658ORF710P (81% identity) | Hpa25ORF2320P | |
| 2335 | DUF262 domain-containing protein | |||
| 6605 | 55 aa hypothetical protein | |||
| 6610 | M | M.Hpa1ORF24265P (51% identity) | M.Hpa25ORF6610AP | |
| 6615 | 46 aa hypothetical protein | |||
| 6620 | M | M.HspMFKK1ORFCP (18% identity) | M.Hpa25ORF6610BP | |
| 6625 | pyocin activator PrtN family protein | |||
| 12195 | ATP-binding protein | |||
| 12200 | M | M.Hpa1ORF4000AP (51% identity) | M.Hpa25ORF12200P | |
| 12205 | V | V.Hpa1ORF4000P (100% identity) | V.Hpa25ORF12200P | |
| 12210 | 140 aa hypothetical protein | |||
| 24670 | 64 aa hypothetical protein | |||
| 24675 | M | M.Csp24CORF25P (82% identity) | M.Hpa25ORF24675P | |
| 24680 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25090 | 54 aa hypothetical protein | |||
| 25095 | M | M.Hpa1ORF16995P (11% identity) | M.Hpa25ORF25095AP | |
| 25100 | M | M.Hpa1ORF16995P (26% identity) | M.Hpa25ORF25095BP | |
| 25105 | M | M.Hpa1ORF16995P (14% identity) | M.Hpa25ORF25095CP | |
| 25110 | M | M.Hpa1ORF16995P (15% identity) | M.Hpa25ORF25095DP | |
| 25115 | M | M.Hpa1ORF16995P (13% identity) | M.Hpa25ORF25095EP | |
| 25120 | R | Hpa1ORF16995P (45% identity) | Hpa25ORF25095AP | |
| 25125 | R | Hpa1ORF16995P (20% identity) | Hpa25ORF25095BP | |
| 25130 | R | Hpa1ORF16995P (30% identity) | Hpa25ORF25095CP | |
| 25135 | IS66 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3405 | type I restriction endonuclease subunit R | |||
| 3410 | R | Ppa46540McrCP (100% identity) | Hpa25McrCP | |
| 3415 | R | Ppa46540McrBP (69% identity) | Hpa25McrBP | |
| 3420 | 85 aa hypothetical protein | |||