Escherichia coli B19429 |
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Putative Escherichia coli B19429 RM systems
Ref: Maguire,M. unpublished
REBASE ref # 38210
| Sequence length: | GenBank #: | |
| Chromosome: | 5,159,281 bp | CP142919 |
| plasmid pB19429_1: | 120,124 bp | CP142920 |
| plasmid pB19429_3: | 48,552 bp | CP142922 |
REBASE acronym: Eco9429
Org_num: 75241
All begin VYI51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20030 | endoribonuclease SymE | |||
| 20035 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco9429ORF20040P |
| 20040 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco9429ORF20040P |
| 20045 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco9429ORF20040P |
| 20050 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6280 | drug/metabolite exporter YedA | |||
| 6285 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco9429DcmP |
| 6290 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco9429DcmP |
| 6295 | HD domain-containing protein | |||
| 7235 | phage portal protein | |||
| 7240 | R | EcosEC21ORF7960P (100% identity) | Eco9429ORF7250P | |
| 7245 | O-methyltransferase | |||
| 7250 | M | M.Sbo812ORFEP (100% identity) | M.Eco9429ORF7250P | |
| 7255 | replication endonuclease | |||
| 9610 | PerC family transcriptional regulator | |||
| 9615 | M | M.EcoPnDogORFCP (100% identity) | GATC | M.Eco9429ORF9615P |
| 9620 | DUF1382 family protein | |||
| 13720 | DNA-binding transcriptional regulator Fis | |||
| 13725 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco9429ORF13725P |
| 13730 | DUF2556 family protein | |||
| 14250 | ribulose-phosphate 3-epimerase | |||
| 14255 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco9429DamP |
| 14260 | cell division protein DamX | |||
| plasmid pB19429_1 | ||||
| 25625 | 73 aa hypothetical protein | |||
| 25630 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco9429ORF25630P |
| 25635 | 103 aa hypothetical protein | |||
| plasmid pB19429_3 | ||||
| 26350 | 103 aa hypothetical protein | |||
| 26355 | M | M.Ssp14523ORF22990P (100% identity) | M.Eco9429ORF26355P | |
| 26360 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20045 | type I restriction-modification system | |||
| 20050 | R | EcosS1MrrP (100% identity) | Eco9429MrrP | |
| 20055 | GTPase | |||