Dietzia cinnamea 55 |
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Putative Dietzia cinnamea 55 RM systems
Ref: Hirsch,A.M. et al. unpublished
REBASE ref # 37961
| Sequence length: | GenBank #: | |
| Chromosome: | 3,621,320 bp | CP143053 |
| plasmid unnamed: | 73,967 bp | CP143054 |
REBASE acronym: Dci55
Org_num: 75335
All begin VYL96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 40 | 273 aa hypothetical protein | |||
| 45 | M | M.DspW5195ORF6470P (32% identity) | M.Dci55ORF45AP | |
| 50 | M | M.DspW5195ORF6470P (51% identity) | M.Dci55ORF45BP | |
| 55 | DNA gyrase subunit A | |||
| 925 | DNA-binding protein | |||
| 930 | M | M.Dsp184ORFDP (89% identity) | M.Dci55ORF930P | |
| 935 | S | S.Cti744ORFGP (32% identity) | S.Dci55ORF930P | |
| 940 | RNA-binding domain-containing protein | |||
| 945 | R | DspW5195IP (98% identity) | Dci55ORF930P | |
| 950 | 133 aa hypothetical protein | |||
| 16175 | 207 aa hypothetical protein | |||
| 16180 | M | M.Dspp6bORF16595P (94% identity) | M.Dci55ORF16180P | |
| 16185 | S | S.Rrh21198ORF5881P (48% identity) | S.Dci55ORF16180P | |
| 16190 | R | DspTHPORFHP (96% identity) | Dci55ORF16180P | |
| 16195 | ISL3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2150 | ATP-binding protein | |||
| 2155 | M | M.Dsp184ORFEP (96% identity) | M.Dci55ORF2155P | |
| 2160 | 179 aa hypothetical protein | |||
| 2165 | 292 aa hypothetical protein | |||
| 2170 | 740 aa hypothetical protein | |||
| 2175 | PD-(D/E)XK motif protein | |||
| 2180 | Z1 domain-containing protein | |||
| 2185 | V | V.Mal12272ORF25670P (53% identity) | V.Dci55ORF2155P | |
| 2190 | 365 aa hypothetical protein | |||
| 10580 | DEAD/DEAH box helicase | |||
| 10585 | RM | DspTHPORFIP (68% identity) | Dci55ORF10585P | |
| plasmid unnamed | ||||
| 16980 | IS1380 family transposase | |||
| 16985 | M | M.Nar177ORF395P (71% identity) | M.Dci55ORF16985P | |
| 16990 | 717 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10355 | transcription elongation factor GreA | |||
| 10360 | R | Dma43672McrBP (98% identity) | Dci55McrBP | |
| 10365 | R | DspW5195McrCP (65% identity) | Dci55McrCP | |
| 10370 | SGNH/GDSL hydrolase family protein | |||