Escherichia coli T28R |
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Putative Escherichia coli T28R RM systems
Ref: Ding,P. unpublished
REBASE ref # 38139
| Sequence length: | GenBank #: | |
| Chromosome: | 4,606,706 bp | CP142708 |
| plasmid pT28R-F1: | 354,983 bp | CP142705 |
| plasmid pT28R-F2: | 354,983 bp | CP142706 |
| plasmid pT28R-F3: | 263,549 bp | CP142707 |
REBASE acronym: Eco28R
Org_num: 74063
All begin VVK16_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7065 | cell division protein DamX | |||
| 7070 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco28RDamP |
| 7075 | ribulose-phosphate 3-epimerase | |||
| 10590 | TraR/DksA family transcriptional regulator | |||
| 10595 | M | M.EcoT28RORF5110P (100% identity) | M.Eco28RORF10595P | |
| 10600 | replication endonuclease | |||
| 14360 | phosphohydrolase | |||
| 14365 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco28RDcmP |
| 14370 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco28RDcmP |
| 14375 | drug/metabolite exporter YedA | |||
| plasmid pT28R-F1 | ||||
| 160 | 55 aa hypothetical protein | |||
| 165 | M | M.Sen23ORF25130P (100% identity) | CCWGG | M.Eco28RORF165P |
| 170 | thermonuclease family protein | |||
| 640 | DNA-binding protein | |||
| 645 | M | M.Ype21801ORF197P (100% identity) | M.Eco28RORF645P | |
| 650 | 273 aa hypothetical protein | |||
| plasmid pT28R-F2 | ||||
| 2155 | 273 aa hypothetical protein | |||
| 2160 | M | M.Ype21801ORF197P (100% identity) | M.Eco28RORF2160P | |
| 2165 | DNA-binding protein | |||
| 2635 | thermonuclease family protein | |||
| 2640 | M | M.Sen23ORF25130P (100% identity) | CCWGG | M.Eco28RORF2640P |
| 2645 | 55 aa hypothetical protein | |||
| plasmid pT28R-F3 | ||||
| 4970 | DNA-binding protein | |||
| 4975 | M | M.Ype21801ORF197P (100% identity) | M.Eco28RORF4975P | |
| 4980 | 273 aa hypothetical protein | |||