Escherichia coli Case 4 |
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Putative Escherichia coli Case 4 RM systems
Ref: Hans,J.B. unpublished
REBASE ref # 38132
Complete sequence: 5,230,654 bp
GenBank #: CP142440
REBASE acronym: EcoCase4
Org_num: 74033
All begin VUP54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 450 | sce7726 family protein | |||
| 455 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | EcoCase4ORF460P |
| 460 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.EcoCase4ORF460P |
| 465 | S | S.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | S.EcoCase4ORF460P |
| 470 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2115 | cell division protein DamX | |||
| 2120 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCase4DamP |
| 2125 | ribulose-phosphate 3-epimerase | |||
| 6805 | 344 aa hypothetical protein | |||
| 6810 | R | EcoGTEN97ORFFP (100% identity) | EcoCase4ORF6815P | |
| 6815 | M | M.EcoT040ORF14860P (97% identity) | M.EcoCase4ORF6815P | |
| 6820 | integrase | |||
| 7180 | Com family DNA-binding transcriptional | |||
| 7185 | M | M.Eco39205ORF7150P (100% identity) | M.EcoCase4ORF7185P | |
| 7190 | ribosome-associated translation inhibitor RaiA | |||
| 11035 | phosphohydrolase | |||
| 11040 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.EcoCase4DcmP |
| 11045 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoCase4DcmP |
| 11050 | drug/metabolite exporter YedA | |||
| 11625 | TrmB family transcriptional regulator | |||
| 11630 | M | M.SflJ17BORF23540P (100% identity) | A | M.EcoCase4ORF11630P |
| 11650 | 50 aa hypothetical protein | |||
| 22040 | HNH endonuclease | |||
| 22045 | R | Sso8ORF19860P (100% identity) | EcoCase4ORF22045P | |
| 22050 | 100 aa hypothetical protein | |||
| 22400 | 174 aa hypothetical protein | |||
| 22405 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoCase4ORF22405P |
| 22410 | ATP-binding protein | |||
| 22415 | response regulator receiver domain | |||
| 22420 | R | Ecou021ORF20225P (100% identity) | EcoCase4ORF22420P | |
| 22425 | 97 aa hypothetical protein | |||