Escherichia coli Case 6 |
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Putative Escherichia coli Case 6 RM systems
Ref: Hans,J.B. unpublished
REBASE ref # 38132
Complete sequence: 5,358,846 bp
GenBank #: CP142442
REBASE acronym: EcoCase6
Org_num: 74035
All begin VUP52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 470 | sce7726 family protein | |||
| 475 | R | EcoCase5ORF15390P (100% identity) | CAAYNNNNNCTGC | EcoCase6ORF480P |
| 480 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.EcoCase6ORF480P |
| 485 | S | S.SflN116ORF3940P (99% identity) | CAAYNNNNNCTGC | S.EcoCase6ORF480P |
| 490 | AAA family ATPase | |||
| 22100 | restriction endonuclease | |||
| 22105 | M | M.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | M.EcoCase6ORF22105P |
| 22110 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.EcoCase6ORF22105P |
| 22115 | R | Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | EcoCase6ORF22105P |
| 22120 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2320 | cell division protein DamX | |||
| 2325 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCase6DamP |
| 2330 | ribulose-phosphate 3-epimerase | |||
| 10230 | phosphohydrolase | |||
| 10235 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoCase6DcmP |
| 10240 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoCase6DcmP |
| 10245 | drug/metabolite exporter YedA | |||
| 14590 | DUF3927 family protein | |||
| 14605 | M | M.Sso1093ORF10290P (100% identity) | A | M.EcoCase6ORF14605P |
| 14610 | TrmB family transcriptional regulator | |||
| 23485 | BREX-1 system phosphatase PglZ type A | |||
| 23490 | RM | Eco28613ORF23355P (100% identity) | EcoCase6ORF23490P | |
| 23495 | BREX system P-loop protein BrxC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22095 | 34 aa hypothetical protein | |||
| 22100 | R | Ecost88MrrP (100% identity) | EcoCase6MrrP | |
| 22105 | class I SAM-dependent DNA methyltransferase | |||