Escherichia coli ExPEC_A329 |
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Putative Escherichia coli ExPEC_A329 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 38134
| Sequence length: | GenBank #: | |
| Chromosome: | 4,938,982 bp | CP142566 |
| plasmid pA329_p0: | 279,587 bp | CP142567 |
REBASE acronym: Eco329
Org_num: 74042
All begin SM985_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12960 | transcription factor | |||
| 12965 | M | M.EcosE2ORF13465P (100% identity) | M.Eco329ORF12965P | |
| 12970 | S | S.Ecos2020ORFCP (100% identity) | YTCANNNNNNGTTY | S1.Eco329ORF12965P |
| 12975 | toxin-antitoxin system toxin DNA ADP-ribosyl | |||
| 12980 | toxin-antitoxin system antitoxin DNA ADP-ribosyl | |||
| 12985 | R | Sbo49812IP (100% identity) | Eco329ORF12965P | |
| 12990 | S | S2.EcoMEC0001ORF18360P (100% identity) | S2.Eco329ORF12965P | |
| 12995 | IS3-like element IS600 family transposase | |||
| 18120 | restriction endonuclease | |||
| 18125 | M | M.Esp9308ORFIP (100% identity) | GACNNNNNTRRG | M.Eco329ORF18125P |
| 18130 | S | S.EcosEC9ORF12765P (100% identity) | GACNNNNNTRRG | S.Eco329ORF18125P |
| 18135 | R | EcosEC9ORF12765P (100% identity) | GACNNNNNTRRG | Eco329ORF18125P |
| 18140 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | DEAD/DEAH box helicase | |||
| 1755 | RM | Eco4GORF3785P (70% identity) | Eco329ORF1755AP | |
| 1760 | ISL3 family transposase | |||
| 1765 | lincosamide nucleotidyltransferase Lnu(G) | |||
| 1770 | transposase family protein | |||
| 1775 | permease | |||
| 1780 | helix-turn-helix domain-containing protein | |||
| 1785 | RM | Eco444ORFGP (27% identity) | Eco329ORF1755BP | |
| 7495 | phosphohydrolase | |||
| 7500 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco329DcmP |
| 7505 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco329DcmP |
| 7510 | drug/metabolite exporter YedA | |||
| 18320 | HNH endonuclease | |||
| 18325 | R | EcosEC9ORF12570P (100% identity) | Eco329ORF18325P | |
| 18330 | 332 aa hypothetical protein | |||
| 18545 | conjugal transfer protein TraG N-terminal | |||
| 18550 | R | SflN107ORF20240P (100% identity) | Eco329ORF18550P | |
| 18555 | cell surface composition regulator GlgS | |||
| 23265 | cell division protein DamX | |||
| 23270 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco329DamP |
| 23275 | ribulose-phosphate 3-epimerase | |||
| plasmid pA329_p0 | ||||
| 23815 | 48 aa hypothetical protein | |||
| 23820 | M | M.YpsF1ORFBP (100% identity) | M.Eco329ORF23820P | |
| 23825 | 202 aa hypothetical protein | |||
| 23935 | DNA-binding protein | |||
| 23940 | M | M.YpsF1ORFDP (95% identity) | M.Eco329ORF23940P | |
| 23945 | 277 aa hypothetical protein | |||
| 24630 | 55 aa hypothetical protein | |||
| 24635 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco329ORF24635P |
| 24640 | thermonuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18115 | BrnT family toxin | |||
| 18120 | R | EcosEC9MrrP (100% identity) | Eco329MrrP | |
| 18125 | class I SAM-dependent DNA methyltransferase | |||