Helicobacter pylori P08205 |
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Putative Helicobacter pylori P08205 RM systems
Ref: Choi,J.G. et al. unpublished
REBASE ref # 37993
Complete sequence: 1,581,974 bp
GenBank #: CP141773
REBASE acronym: Hpy05
Org_num: 73864
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy6ORF9250P (97% identity) | M.Hpy05ORFXP | |
| ??? | S | S.HpyK020XV (77% identity) | S.Hpy05ORFXP | |
| ??? | R | HpyK008ORF2545P (97% identity) | Hpy05ORFXP | |
| ??? | S | S.HpyF216ORFLP (95% identity) | CAANNNNNNNTTC | S.Hpy05ORFWP |
| ??? | R | HpyK033ORF2445P (94% identity) | CCANNNNNNTAA | Hpy05ORFPP |
| ??? | M | M.HpyK052ORF2235P (97% identity) | CCANNNNNNTAA | M.Hpy05ORFPP |
| ??? | S | S.HpyV007ORF2320P (98% identity) | CCANNNNNNTAA | S.Hpy05ORFPP |
| ??? | R | HpyK033ORF7350P (96% identity) | CRTANNNNNNNTC | Hpy05ORFC1P |
| ??? | M | M.Hpyfe110ORF8065P (97% identity) | CRTANNNNNNNTC | M.Hpy05ORFC1P |
| ??? | S | S.HpyK154ORF7560P (99% identity) | CRTANNNNNNNTC | S.Hpy05ORFC1P |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyK036VIII (97% identity) | GTNNAC | M.Hpy05ORFYP |
| ??? | R | HpyM6CORFOP (98% identity) | GTNNAC | Hpy05ORFYP |
| ??? | R | Hpyfe65ORF3785P (100% identity) | CCNNGG | Hpy05ORFVP |
| ??? | M | M.HpyK033III (99% identity) | CCNNGG | M.Hpy05ORFVP |
| ??? | RM | Hpyfe59ORF3850P (64% identity) | Hpy05ORFUBP | |
| ??? | RM | Hpyfe115ORF3850P (27% identity) | Hpy05ORFUAP | |
| ??? | M | M.Hpyfe77ORF545P (99% identity) | GAATTC | M.Hpy05ORFB1P |
| ??? | R | HpyK035VIIIP (99% identity) | Hpy05ORFB1P | |
| ??? | M | M.HpyK154ORF1400P (99% identity) | CATG | M.Hpy05ORFZP |
| ??? | R | R1.HpyJSHR31ORF2760P (51% identity) | CATG | R1.Hpy05ORFZP |
| ??? | R | R1.HpyTN2ORF1370P (96% identity) | CATG | R2.Hpy05ORFZP |
| ??? | R | Hpyfe101ORF4780P (100% identity) | ACGT | Hpy05ORFSP |
| ??? | M | M.HpyK154ORF3315P (100% identity) | ACGT | M.Hpy05ORFSP |
| ??? | R | Hpyfe37ORF4750P (100% identity) | ACNGT | Hpy05ORFRP |
| ??? | M | M.HpySG33II (98% identity) | ACNGT | M.Hpy05ORFRP |
| ??? | M | M.HpyK016II (98% identity) | ATTAAT | M.Hpy05ORFQP |
| ??? | M | M.HpyPU006ORF1745P (99% identity) | GCNGC | M.Hpy05ORFOP |
| ??? | M | M.HpyK111V (98% identity) | CTNAG | M.Hpy05ORFNP |
| ??? | R | HpyUM084ORF1020P (96% identity) | CTNAG | Hpy05ORFNP |
| ??? | M | M.Hpyfe97ORF6090P (100% identity) | CCGG | M.Hpy05ORFMP |
| ??? | R | HpyF93ORFAP (95% identity) | CCGG | Hpy05ORFMP |
| ??? | R | Hpyfe123ORF6825P (94% identity) | GATC | Hpy05ORFLP |
| ??? | M | M.Hpyfe37ORF6460P (98% identity) | GATC | M.Hpy05ORFLP |
| ??? | R | Hpyfe81ORF1020P (100% identity) | ACGG | Hpy05ORFKP |
| ??? | M | M.HpyK053XVI (99% identity) | ACGG | M.Hpy05ORFKP |
| ??? | M | M.HpyHK840ORFHP (99% identity) | CCTTC | M.Hpy05ORFJP |
| ??? | R | HpyK001XIP (98% identity) | CCTTC | Hpy05ORFJP |
| ??? | R | Hpyfe58ORF7025P (100% identity) | GTSAC | Hpy05ORFHP |
| ??? | M | M.Hpy192ORFCP (99% identity) | GTSAC | M.Hpy05ORFHP |
| ??? | R | Hpy3sORF990P (96% identity) | CCTC | Hpy05ORFIP |
| ??? | M | M1.Hpyfe54ORF6825P (98% identity) | CCTC | M1.Hpy05ORFIP |
| ??? | M | M1.HpySP06IX (98% identity) | CCTC | M2.Hpy05ORFIP |
| ??? | R | HpyK052VIP (97% identity) | GANTC | Hpy05ORFFP |
| ??? | M | M.HpySG26VII (99% identity) | GANTC | M.Hpy05ORFFP |
| ??? | RM | Hpyfe79ORF7095P (93% identity) | Hpy05ORFGP | |
| ??? | R | HpyK154ORF7460P (99% identity) | TGCA | Hpy05ORFEP |
| ??? | M | M.HpyK154ORF7460P (100% identity) | TGCA | M.Hpy05ORFEP |
| ??? | RM | Hpy04ORFIP (90% identity) | Hpy05ORFCP | |
| ??? | R | HpyPE108XVIP (96% identity) | CCATC | Hpy05ORFD1P |
| ??? | M | M2.HpySW04VII (100% identity) | CCATC | M1.Hpy05ORFD1P |
| ??? | M | M2.HpyT022V (99% identity) | M2.Hpy05ORFD1P | |
| ??? | RM | HpyK052ORF6785P (99% identity) | CYANNNNNNTGA | Hpy05ORFBP |
| ??? | S | S.HpyBGR1ORF7355P (92% identity) | S.Hpy05ORFBP | |
| ??? | R | Hpyfe85ORF2060P (100% identity) | TCNNGA | Hpy05ORFA1P |
| ??? | M | M.HpyU203XII (100% identity) | TCNNGA | M.Hpy05ORFA1P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyT027ORF6930P (97% identity) | M.Hpy05ORFTP | |
| ??? | R | HpyUM032ORF4185P (94% identity) | Hpy05ORFTP | |
| ??? | M | M.Hpyfe59ORF40P (95% identity) | M.Hpy05ORFDP | |
| ??? | R | HpyK004ORF7100P (98% identity) | Hpy05ORFDP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyK021GmrSD2P (96% identity) | Hpy05GmrSD2P | |
| ??? | R | Hpyfe81GmrSD2P (89% identity) | Hpy05GmrSDP | |