Helicobacter pylori P07353 |
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Putative Helicobacter pylori P07353 RM systems
Ref: Choi,J.G. et al. unpublished
REBASE ref # 37993
Complete sequence: 1,568,376 bp
GenBank #: CP141774
REBASE acronym: Hpy53
Org_num: 73861
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.HpyT004XIV (98% identity) | CCANNNNNNTG | S.Hpy53ORFZP |
| ??? | M | M.HpyK024ORF2270P (96% identity) | CCANNNNNNTG | M.Hpy53ORFZP |
| ??? | R | Hpy271ORFPP (93% identity) | CCANNNNNNTG | Hpy53ORFZP |
| ??? | M | M.HpyP82ORFGP (79% identity) | VTAYNNNNNNNTTG | M.Hpy53ORFXP |
| ??? | S | S.HpyK048ORF4155P (98% identity) | VTAYNNNNNNNTTG | S.Hpy53ORFXP |
| ??? | R | HpyK019XVP (96% identity) | VTAYNNNNNNNTTG | Hpy53ORFXP |
| ??? | S | S.HpyPU008ORF3855P (66% identity) | CCANNNNNNRTAY | S.Hpy53ORFRP |
| ??? | S | S.Hpybs2ORFLP (97% identity) | CRTANNNNNNRTAA | S.Hpy53ORFHP |
| ??? | M | M.HpyAR9III (98% identity) | CRTANNNNNNRTAA | M.Hpy53ORFHP |
| ??? | R | HpyK048ORF7150P (97% identity) | CRTANNNNNNRTAA | Hpy53ORFHP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyMA08IX (99% identity) | TCGA | M.Hpy53ORFVP |
| ??? | R | HpyK116IIP (96% identity) | CCGG | Hpy53ORFWP |
| ??? | M | M.Hpyfe39ORF5855P (99% identity) | CCGG | M.Hpy53ORFWP |
| ??? | M | M.Hpyfe99ORF5105P (98% identity) | ATTAAT | M.Hpy53ORFSP |
| ??? | M | M.Hpy334ORFIP (99% identity) | ACNGT | M.Hpy53ORFTP |
| ??? | R | HpyK119ORF2340P (100% identity) | ACNGT | Hpy53ORFTP |
| ??? | M | M.Hpy3ORF5720P (99% identity) | ACGT | M.Hpy53ORFUP |
| ??? | R | Hpy1136ORFJP (97% identity) | ACGT | Hpy53ORFUP |
| ??? | hypothetical protein | |||
| ??? | R | HpyP76ORFCP (97% identity) | GTAC | Hpy53ORFQP |
| ??? | M | M.HpyOK314ORFVP (98% identity) | GTAC | M.Hpy53ORFQP |
| ??? | R | HpyK019XP (99% identity) | GTNNAC | Hpy53ORFPP |
| ??? | M | M.HpyF216ORFJP (98% identity) | GTNNAC | M.Hpy53ORFPP |
| ??? | M | M.Hpyfe88ORF2055P (98% identity) | TCNNGA | M.Hpy53ORFOP |
| ??? | R | HpyMKM6ORF1034P (99% identity) | TCNNGA | Hpy53ORFOP |
| ??? | M | M.HpyK025XIV (96% identity) | GCGC | M.Hpy53ORFNP |
| ??? | M | M.Hpy238ORF5875P (97% identity) | CATG | M.Hpy53ORFMP |
| ??? | R | HpyK020IP (93% identity) | CATG | Hpy53ORFMP |
| ??? | S | S.HpySW16ORF7020P (41% identity) | S.Hpy53ORFKP | |
| ??? | RM | HpySORF7540P (96% identity) | Hpy53ORFKP | |
| ??? | RM | HpyJ019XIII (89% identity) | Hpy53ORFJP | |
| ??? | M | M.HpySW32XI (98% identity) | TGCA | M.Hpy53ORFGP |
| ??? | R | Hpy30VIP (99% identity) | TGCA | Hpy53ORFGP |
| ??? | RM | HpyK110ORF280P (66% identity) | Hpy53ORFDAP | |
| ??? | RM | HpyQ59ORFZP (29% identity) | Hpy53ORFDBP | |
| ??? | M | M.Hpyfe22ORF7025P (99% identity) | GANTC | M.Hpy53ORFEP |
| ??? | R | HpyK048VP (98% identity) | GANTC | Hpy53ORFEP |
| ??? | M | M1.HpyI005V (99% identity) | CCTC | M1.Hpy53ORFCP |
| ??? | M | M2.HpyT001IVP (99% identity) | CCTC | M2.Hpy53ORFCP |
| ??? | R | HpyL026VP (88% identity) | CCTC | Hpy53ORFCP |
| ??? | M | M.HpyKH39ORFPP (98% identity) | GTSAC | M.Hpy53ORFBP |
| ??? | R | HpyKA2VIP (99% identity) | GTSAC | Hpy53ORFBP |
| ??? | M | M1.HpyK28ORF990P (99% identity) | M1.Hpy53ORFA1P | |
| ??? | M | M2.HpyK116ORF1185P (96% identity) | M2.Hpy53ORFA1P | |
| ??? | R | R1.Hpyfe28ORF6155P (90% identity) | R1.Hpy53ORFA1P | |
| ??? | R | R2.HpyK110ORF5290P (96% identity) | R2.Hpy53ORFA1P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyTW06ORF6590P (97% identity) | M.Hpy53ORFLP | |
| ??? | R | Hpy928ORFWP (95% identity) | Hpy53ORFLP | |
| ??? | R | HpyGU82AORFCP (97% identity) | Hpy53ORFIP | |
| ??? | M | M.Hpyfe59ORF40P (96% identity) | M.Hpy53ORFIP | |
| ??? | R | Hpyfe15ORF6875P (95% identity) | Hpy53ORFFP | |
| ??? | M | M.HpyK025ORF200P (97% identity) | M.Hpy53ORFFP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyOK314GmrSD2P (96% identity) | Hpy53GmrSD2P | |
| ??? | R | HpyGRE018GmrSDP (86% identity) | Hpy53GmrSDP | |